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sw_8_scaffold_546_3

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 5405..5905

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MYF2_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 160.0
  • Bit_score: 134
  • Evalue 7.20e-29
Small subunit ribosomal protein S1 {ECO:0000313|EMBL:JAC66878.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 155.0
  • Bit_score: 143
  • Evalue 2.20e-31
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 128.0
  • Bit_score: 129
  • Evalue 8.50e-28

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 501
ATGGAAGCTGACCGCGCTCGCAGCCGCCTCATTCTTAGCAATCGCTACGCCAAAGCAAAACAGTCTGGAAGCGAATTTTCCGTTGGCGACCTTGTGCACGGCAAGGTGGTCGCCATCAAGCCATATGGTGCGTTTGTCGACGCCGGCCAAATCGCTGGCCTGCTGCATCAGTCGCAGATCAGCGCTCAGCGCGTTCCCGACGTGACAAAGGTGTTCAGCGTTGGTGACGAGGTAAAATGCATTGTCATGAGCTATGATCCGGAAAAGAGCCGACTATCTCTTTCCACGCGCAAACTCGAGTCCAATCCAGGCGACATGCTGAATGACCCCGGTAAAGTGCAGGAGCAAGCCGAAGAGAAAGCAGCTGAATATAAGAAAATGCTGAGCAACATCGAGGCGCATACAAGCGGCCTAGACGATGAGCTGAACAGCTTGCTGCAAGCGGCGAGGCCGGAAGATAGCAATGGGCAGCATGGAAATGACAACTCATCCAGTGATTGA
PROTEIN sequence
Length: 167
MEADRARSRLILSNRYAKAKQSGSEFSVGDLVHGKVVAIKPYGAFVDAGQIAGLLHQSQISAQRVPDVTKVFSVGDEVKCIVMSYDPEKSRLSLSTRKLESNPGDMLNDPGKVQEQAEEKAAEYKKMLSNIEAHTSGLDDELNSLLQAARPEDSNGQHGNDNSSSD*