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sw_8_scaffold_5497_3

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 1893..2384

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4D3D2_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 170.0
  • Bit_score: 95
  • Evalue 4.80e-17
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo3g138810.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 170.0
  • Bit_score: 97
  • Evalue 1.70e-17
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 87.0
  • Bit_score: 74
  • Evalue 3.20e-11

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Taxonomy

Brassica oleracea → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 492
ATGAAGGTGAACGCTCTCATGCGTCCCCAGCCCTGGCGCTTCGCCACTGCTGCCCTCGTTCACGGCAGCCTCATGCACCTCCTCGTCAATTCCGTCTCCCTCTCCGACATCGGCCACACCTTCGAGTCTCTTTGCGGCCGTGATCGCACTCTTGCCGTCTATGGCTGCTCGGCCGTCTGTGGCAACGCAATTAGTGTTTTCCTCAACAGCAACAACGCCCTCGGCGCCTCCGGCGCTATCATGGGCCTCGCTGGCGCGTTCGCAACCACGCTCGGCGTCAACAGGCGCTTCTTGAGTCCCCAGGCGATGGAGATGCGCAACACTATTTTACGCGTTGTTGTTCTCGGAGGGATTGCCTCCGCGTACTGCTTCGGCCCACGCCTGAAACGCCGAGGCCTTCAAATCGTTGATGAACCGCCGATTCCAACGTTTGCTAGCACTGGAAGCCTTGCAGGACTTACATTGAGGCGTCTGCCGCCAGACCTCCGCTAA
PROTEIN sequence
Length: 164
MKVNALMRPQPWRFATAALVHGSLMHLLVNSVSLSDIGHTFESLCGRDRTLAVYGCSAVCGNAISVFLNSNNALGASGAIMGLAGAFATTLGVNRRFLSPQAMEMRNTILRVVVLGGIASAYCFGPRLKRRGLQIVDEPPIPTFASTGSLAGLTLRRLPPDLR*