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sw_8_scaffold_5642_1

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 1..2829

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 829.0
  • Bit_score: 689
  • Evalue 1.20e-195
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; Contains:; Mja rpoA1 intein; Mja rpol A' intein; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 829.0
  • Bit_score: 689
  • Evalue 6.00e-195
DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA1_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 829.0
  • Bit_score: 689
  • Evalue 4.30e-195

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Taxonomy

Methanocaldococcus jannaschii → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2829
GACATCGGCGACGCCAGCGCGGACGCCGACGAGAAACTCGGCCAGTTCCGCCGCGACCTCCGGCAGGCCCGCGATCTCGACGAGGACCTGGGCGACGTGCTCAAGTCCGCGATGCGCTCGAGTCGGCGCTCCTCGACGGACACAAAAAAGGAGCGGTGCCCCTACTGCGGGGCCGTCCAGTACGACATCAAACACGAAAAGCCCACGACCTACTACGAGGTCCAGCGCGTGCTCTCCTCGGAGTACCCCGAGCGCATCGCCGCCGCGATGGAACCCACCGAGGACAGGGACCGGGTCTCCCCGACCGACCTCGCGGACCGGACCGGCATCGACATCTCGCGGGTTCAGGAGATCCTCTCGGGCTCGTTCCGTCCCCGGGAGGACGACCGCAAGGCCATCGAGTCCGCGCTCAACGTCGACCTCACCGAGGAGGACATGAACAAGCTCATGCCCTCGGACATCCGCGACTGGTTCGAGGACATCCCCGACGAAGACCTGGCGGTCATCGGGATGGACCCCGAGACGTCCCGCCCGGAGTGGATGATTCTCACCGTGTTGCCGGTGCCGCCGGTGACGGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAGGACGACCTCACGCACAAGCTGGTCGACATCATCCGCATCAACCAGCGGTTCATGGAGAACCGCGAGGCCGGCGCCCCGCAACTCATCATCGAGGACCTCTGGGAACTCCTCCAGTACCACGTCACCACGTTTATGGACAACGAAATCTCGGGCACGCCCCCGGCCCGGCACCGCTCGGGCCGGCCGCTGAAGACCCTCTCCCAGCGCCTGAAGGGCAAGGAGGGTCGGTTCCGGGGGTCGCTGTCGGGCAAGCGCGTGAACTTCTCTGCCCGGACGGTCATCTCGCCCGACCCCACCCTCTCGCTGAACGAGGTTGGCGTCCCCGAACGGGTGGCGACGGAGATGACCCAAACGATGAACGTCAACGAGCGCAACCTCCAGAAGGCACGCCGCTACGTCGCCAACGGGCCGGAGGGACACCCGGGCGCGAACTACGTGCGTCGCCACGACGACCGCCGGCTGAAGGTGACCGAGAAGAACTGCGAGGAACTCGCCGAGAAGGTCGAGCCGGGCTGGGAGGTCTCCCGGCACCTCATCGACGGCGACGTCGTCATCTTCAACCGCCAGCCCTCGCTGCACCGCATGTCCATCATGGCCCACGAGGTGGTCGTGATGCCCTACAAGACCTTCCGGCTCAATACGGTCGTGTGTGTCGCCGGTGACACGACGGTCGACTGTGGTGGATACAGTCGCCGTATCGAGGATATCGAGGACGACTGGGACGAAGAAGTCCTCACGACGTACGATCCCGAGGCCAGCGAGACACGACCGACCGGACTGCAGGACTTCTGGGCACTCGACCCTGCCGAGTATGGTGCGACAGTCCACGAAATCGAGACCGAGTTCGGGTCCGTCGTTGCGACGTCCGACCATCCGTTCGAGACGCCGGACGGGCCGGTTCCAGTCGAGGAACTCGAACCCGGTGACCGCATCCTCCGCCGACCGATCGACCTCCCCGAGTTCGAACCGAGTGCTGACGAGCAGGTCGTCGTGACCGAGGACGACATCGAAGCGGCGGCCCCCGATGCGACGTACCTCGGACACGCAATGCGAACGCTCGACAATCTCGTTCCCTTCGACGCACACTCCCGGGAAGGCGTCGCGGCTGCACGGCTGGTCGGTCATTTGTTCGGCGACGGAACGCTGGATTTGAACGGACAGACCGGTCGGCTGTTCTTCCGGGCCGCCGAGGAAGACCTCGACCGTATCCGGGACGATCTTGAACTGCTCGGGTTCGAACCCGAGGAACCAGTGGTGAAAGAAAACACCGGTGAGATCGTCGCTGCCGACGGCGGATCGACGACAGTCAGTGGAAGCGGCTGGTCGATGAAACTCGGCAGCAAACCGTTGTCGTCGTTCATGGCCGCACTCGGCGCGCCGGTCGGCGATAAAGTCGAGACCGACCGGACAGTCCCAGACTGGATTCTGGAGGGGCCGACGGCAGTCAAGCGTGCGTTCCTGAGTGCCTACTTCGGCGCAGAACTGAGCACTCCCTGCTATCGCGGCCACAAGCTGTTCAGGCAGCCGGTCTTCAAACTCTCACGAATCAAAAGTGTTCTCGAGGCCGGAAAACAATTCGTCGAAGAAATCGACGCACTACTCGAGCAGTTCGACAGCGGTGTCTCGAATATCCGGATTCGACCGAGAAATCGTCGCTCGGATGGATCGATCTCACAGCGGGTTACTGCCGAACTGGAGGCCAGTTCTGCGTCTCTGGAAGCACTCTTCGGTCGTGTCGGGTACACGTACAACGCAGACGCAGACGCTGAAGCGCGGCTGGCGTACGCCTATCTGTCGGAAAAACCGTCAGGCAAGTTTGCTGTCGAGGAGTATCCTGATTACGAAGAGTGGAAAACACACCGCGTTGCCGACGGGCAAGAGGGATTGATCCGTGACGCTATCGTCGATATCAGAGACGCTGACCACCAGGTAGTCTACGACGTGACGACCACTGACGAGACACACAAGTTTATTTCAGAAAATCTTGTGTGTAATAATTGTCCGCCGTACAACGCCGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCCCGCGCCGAGGCCCGGGTGCTGATGCGCGTCCAGGAACAGATGCTCAGCCCGCGGTTCGGCGAGAACATTCTCGGGGCCATTCAGGACCACGTCACCGGAACCTACCTCCTGACCAACAAGAACCCCCGG
PROTEIN sequence
Length: 943
DIGDASADADEKLGQFRRDLRQARDLDEDLGDVLKSAMRSSRRSSTDTKKERCPYCGAVQYDIKHEKPTTYYEVQRVLSSEYPERIAAAMEPTEDRDRVSPTDLADRTGIDISRVQEILSGSFRPREDDRKAIESALNVDLTEEDMNKLMPSDIRDWFEDIPDEDLAVIGMDPETSRPEWMILTVLPVPPVTAXXXXXXXXXXXXXXXXXEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVATEMTQTMNVNERNLQKARRYVANGPEGHPGANYVRRHDDRRLKVTEKNCEELAEKVEPGWEVSRHLIDGDVVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCVAGDTTVDCGGYSRRIEDIEDDWDEEVLTTYDPEASETRPTGLQDFWALDPAEYGATVHEIETEFGSVVATSDHPFETPDGPVPVEELEPGDRILRRPIDLPEFEPSADEQVVVTEDDIEAAAPDATYLGHAMRTLDNLVPFDAHSREGVAAARLVGHLFGDGTLDLNGQTGRLFFRAAEEDLDRIRDDLELLGFEPEEPVVKENTGEIVAADGGSTTVSGSGWSMKLGSKPLSSFMAALGAPVGDKVETDRTVPDWILEGPTAVKRAFLSAYFGAELSTPCYRGHKLFRQPVFKLSRIKSVLEAGKQFVEEIDALLEQFDSGVSNIRIRPRNRRSDGSISQRVTAELEASSASLEALFGRVGYTYNADADAEARLAYAYLSEKPSGKFAVEEYPDYEEWKTHRVADGQEGLIRDAIVDIRDADHQVVYDVTTTDETHKFISENLVCNNCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQMLSPRFGENILGAIQDHVTGTYLLTNKNPR