ggKbase home page

sw_8_scaffold_582_5

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(4769..5908)

Top 3 Functional Annotations

Value Algorithm Source
endA; tRNA splicing endonuclease (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=24647576 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 383.0
  • Bit_score: 431
  • Evalue 1.10e-117
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1085028 species="Archaea similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 382.0
  • Bit_score: 431
  • Evalue 1.60e-117
tRNA splicing endonuclease similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 390.0
  • Bit_score: 410
  • Evalue 5.70e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1140
ATGCAGCTCCCGTTCGACGGCGACCGGGTGCGGGGCGACAACGCCGCCCGCGAGCAGTTCTACGACGCGCGGGGGTACGGCACACCCCGGGACGGCGGGGTCGCGCTCGCGCCGGTCGAGGCGGCTCACCTCCTGTTCCGGGGCGACCTCGAGCACCTCCTCGACCGCCGGTCCGGCGGGGAGCCGCTGGATTTCGAGTCGTTCCTGGCCTCGAACGCCGTCTCCGAGGTCGACTTCTTCGTCTACAAGGAGCTGCGGGATCGCGGCTTCTACCTCTCGCCGACCGAACTGCTTGCGGGCGACGACGCTGACCGGCGCGAGCACCACGGCGACGCCGACCAGCGCGAGCACGAGGCGAATGGAGCCGGCGACTTCGTGGTGTACCCCCGCGGCGACGGACCCTGGGACGACACCGTCGCCTACCGGGTGTGGACGGTCAGCGAGCGCGCCGACGTGACCGCCGGGACGCTCCGGCGGATCGCGGCCTGCGGCAGCGAGGCCGACGGCGCATCCGATGCCGACGGTGACGGCATCACGGGCGTGCTCGCGGTCGTCGACGAGGAGAGCGAGGTGACGTACCTGGCGGTCGAGGAACCGACGATCGCCGGCTCGACGTACCACGACCTGCCGGCGGTGGCGGGGGCGTTGCTCTCGGACCGCGTGCTCGTCGCCGACCCGCCGGACGCGTTGCACGACCGGGCGTTCTACGGCCAGCCGCTCGACCGCGACGAGCAGCCCGTCCAGCTCTCGCTCGTCGAGGCCGCCTACCTCGCAGAACGCGGTCGCCTGACCGTCGAGGGCGACGCGGAACGGCTCGTGAGCCGCGGCCGCTCGGTCGAGGGCGACCGGTTCGACCGCCGGCTGCGCGCCTACGGCGCGCTGCGAACCGCCGGGATCGTCCCGAAAACCGGGTTCAAGTTCGGCGCTGATTTCCGGACCTACGCCGACGTCGACTCCGTCGATGACCTCGGGCACTCGGAGCTGCTGGTGCGCGTGCTGCCCGCCGACCACACGTTCGCACCCCGGGACCTCGCGCTCGACGTGCGCCTCGCTCACGGGGTCCGCAAACAGCTCGTGTTCGCCCTGACTCACGTCGAGGCCGGCACCGACTGGCTCACCGTCTCCCGCCTGACGCCCTGA
PROTEIN sequence
Length: 380
MQLPFDGDRVRGDNAAREQFYDARGYGTPRDGGVALAPVEAAHLLFRGDLEHLLDRRSGGEPLDFESFLASNAVSEVDFFVYKELRDRGFYLSPTELLAGDDADRREHHGDADQREHEANGAGDFVVYPRGDGPWDDTVAYRVWTVSERADVTAGTLRRIAACGSEADGASDADGDGITGVLAVVDEESEVTYLAVEEPTIAGSTYHDLPAVAGALLSDRVLVADPPDALHDRAFYGQPLDRDEQPVQLSLVEAAYLAERGRLTVEGDAERLVSRGRSVEGDRFDRRLRAYGALRTAGIVPKTGFKFGADFRTYADVDSVDDLGHSELLVRVLPADHTFAPRDLALDVRLAHGVRKQLVFALTHVEAGTDWLTVSRLTP*