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sw_8_scaffold_619_5

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(2335..5874)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=65093 species="Bacteria; Cya similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1763
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE83_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1763
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1763
  • Evalue 0.0

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 3540
ATGGCGTTTTCTTCGGTTATTCGCGCCCTAGAGCGCTCGCCGCTTACAGGGGAACTTCGCACCACACTTAATCAGCAACAATCGCTGCATTTAAATGGGATTCCTCGCCTACCTAAAGGTTTAGTTGCCTCGGCGTTCGCCCAAGGTTCCCAGCAGAACTTGTTTGTTGTCTGTGCCACTCTCGAAGAGGCAGGGCGCTGGGCGGCACAACTCCAGACAATGGATTGGCAGACAGTCCATTTTTACCCCACCTCCGAGGCATCCCCGTATGAACCGTTTGATCCCGAATCAGAGATGAGTTGGGGACAAATGCAAGTGCTGGCAGATTTAGCGATTGCCCGCCCAGAGGGAGTTGCGATTGTGGCAACCGAGCGATCGCTCCAACCTCATCTGCCGCCTCCGGCTGCGTTTCAGTCCTACTGCCTTACCCTGGAAACTGGGATAGCACGGGATTCCAAAACGCTGGATCGACAGTTAACGCAACTTGGATATGAGCGGGTTTCTCTAGTCGAAACGGAAGGGCAATGGAGTCGGCGCGGTGACATCGTGGATGTCTTCCCCGTAGCAGCAGAGTTACCCGTGCGGCTAGAATGGTTTGGCGATGAGTTAGAACAACTCCGGGAATTCGATCCTGTCTCTCAGCGCTCTCTCGATCAGGTGAAACAGTTGGCGTTGACACCGACTAGTTTTGCTCCGATTATTGTTGATGCTTTGAGGGGGAAAGGCGGACAAGGGGAGAAGGAGACGGGGGGACAAGGGGCAATTAATGCTCTGAAAGCTCATCTATCACAAGAGGAACAGGAAGCTCTAGAAGAGGGCAAACTCCCTGAGGGAATGCATCGCTTTTTGGGACTCGCCTTTGACAAACCTGCCTCCCTACTAGATTACCTCCCAGAAAGCACTCTATGCGCCATTGATGAGGTAGAACAGTGTCGTGCCCATAGCGCACGCTGGCTCGAACATACCGAGGAACAGTGGCAAGAACAAGGTAGGGGCGATCCGTCGGTTCGCCCTAACTCGTTACCAAAAATTCATCGCTCTTTTGATGAATCTCTGGTAGCAGCAGCGGCTTTTCAACAACTGTATCTCTCGGAGTTAGCAGAAGAAAATTCTGATGCTGTGAACCTCTCTAGTCGCCCCATTCCCGCTACTCCGCACCAGTTTGGGAAATTAGCTGGGATGCTGCGCGGCGAGCAAGAGGTTTACCACGGCATTAGCCTGAAAAATTTCTCCACCTGGCTGATTTCTGCCCAACCTTCTCGTTCGGTGGCACTGCTGCAAGAACACGATTGTCCAGCTCAGTTTGTCCCCAACTCCCGCGACTATCGGGCGATTGAGCGGCTTCACACCCAGCATATCCCCACTGCGGTGAAATATTCCGGTTTGGCGGAATTGGAAGGGTTTATTCTGCCCACGTTTCGGATTGTTGTAGTTACAGATCGAGAGTTTTTTGGGCAGCACGTTCTAGCAACACCGGGATACATTCGCAAGCGCCGTCGTGCTACCTCCAAACAAGTCGATTTAAATAAGCTGCGCCCTGGGGATTATGTGGTTCATAAAAACCACGGTGTGGGCAAGTTTCTGAAGCTAGAAAGCTGGGAAAACCGCGAGTATCTGGTAGTGCAGTATGAAGACGGTTTGCTGCGTGTACCAGCGGATGCGTTGGAACTGCTGTCTCGATATCGTCGCACAGGCGATCGCGCCCCTACTCTCAACAAAATGTCGGGGAAAGCCTGGGAGCGCACCAAAGATAAAGTTCGCAAGTCAGTGAAGAAGCTGGCGGTGGATTTGCTGGGGCTGTATGCGAAGCGATCACAGCTTTCGGGTTATGCCTATCCGGCGGATGACGTTTGGCAGGAGGAAATGGAAGATTCTTTCCCCTATCAACCAACCCCGGATCAACTCAAGGCAATCCAGGATCTCAAGCGGGATTTGGAAAGCGATAGCCCGATGGATCGATTAGTATGTGGGGATGTGGGATTCGGAAAAACGGAAGTGGCGATACGCGCCATCTTTAAGGCAATTAATGCCAACAAACAAGTCGCCTTCCTCGCCCCCACAACTATCCTTACTCAGCAGCATTACCACACGCTCAAAGAGCGTTTTGCCCCCTATCCCATCAATGTGGGGTTACTCAACCGTTTCCGCACCACTGCCGAACGCCGCGACATTCACAAGCGCCTTGCCACCGGGGAACTAGATGTTGTCGTGGGAACCCACCAACTATTGAATAAAAATGTCAAATTCCATGATTTAGGGATGCTGGTGGTGGACGAAGAACAACGCTTTGGTGTTAACCAGAAAGAGAAGATTAAATCCTTGAAAACGCAGGTGGATGTTCTCACGCTCACTGCTACCCCGATTCCTCGTACTCTCTATATGTCTCTTTCCGGCATTCGGGAAATGAGCTTGATTACCACGCCACCCCCCTCTCGGCGTCCCATTAAAACCCATCTTTCCTCTTATGATTCGGAGGTAGTACGCACAGCCATTCGCAACGAACTAGATCGCGGCGGACAGGCATTCTATGTCGTGCCTCGGGTGGAAGGAATTGAAGGGGTTGCGGCAGGCTTGCGAGAGATGGTTCCTGGGGCGAGAATTGCGATCGCGCACGGGCAAATGCAGGAAGGGGAGTTGGAAGCTACCATGTTGAGCTTCAACAACGCAGAAGCTGACCTCCTGGTTTGCACCACCATTATTGAGTCGGGACTGGATATCCCCCGCGTTAATACTATCGTAATTGAAGATGCCCAGAAGTTTGGGTTGTCCCAACTTTATCAGCTTCGAGGACGAGTGGGGCGTGCCGGGGTGCAGGCACACGCTTGGTTATTATACCCGAAGCAAAGTAAGCTCTCGGATGTGGCACGAAAGCGCTTGCGAGCTTTGCAGGAATTCACGCAATTGGGGTCAGGCTACCAGCTTGCCATGCGAGACCTCGAAATCCGAGGCGTGGGCGAGCTTTTGGGGGCGAAGCAATCTGGGCAAATGGAGTCGGTTGGTTTTGACCTCTACATGAGTATGCTGCAAGAGGCGATTCAAGAGATCCAAGGCTCCGAAATTCCCCAGGTGGAAGACACGCAAGTTGACCTCAATCTGACTGCCTTTATTCCTGCCGATTATATCCCCGATTTAGAGCAGAAAATGGATGCGTATCGCGCAGTTGCTTCTACTACGGATGGGAAAGAACTGGCACAAGTTGCTGCCGACTGGAGCGATCGCTACGGTAGCATTCCCCCCGCTGCCCAACAACTCCTTAGAGTAATCGAACTCAAGCAACTTGCCAAGTCCCTAGGCTTCTCTCGCATTAAACCAGAGGGCAAGCAACATATCGCTCTGGAAACGCCGATGGAAGAACCCGCCTGGAAGCTACTTCAGGGAAATTTACCCGAGCACCTGCAATCCCGGTTTGTCTATTCTCGCGGTAAGGTAACGGTTCGCGGTTTAGGGGTTCTCAAAGTTAACCAACAGTTGGAAAATTTAATTGATTGGCTCGGTAAGATGCAAGGAGCCTTACCCGAACCAGCAGTAACTTCTAGTTAG
PROTEIN sequence
Length: 1180
MAFSSVIRALERSPLTGELRTTLNQQQSLHLNGIPRLPKGLVASAFAQGSQQNLFVVCATLEEAGRWAAQLQTMDWQTVHFYPTSEASPYEPFDPESEMSWGQMQVLADLAIARPEGVAIVATERSLQPHLPPPAAFQSYCLTLETGIARDSKTLDRQLTQLGYERVSLVETEGQWSRRGDIVDVFPVAAELPVRLEWFGDELEQLREFDPVSQRSLDQVKQLALTPTSFAPIIVDALRGKGGQGEKETGGQGAINALKAHLSQEEQEALEEGKLPEGMHRFLGLAFDKPASLLDYLPESTLCAIDEVEQCRAHSARWLEHTEEQWQEQGRGDPSVRPNSLPKIHRSFDESLVAAAAFQQLYLSELAEENSDAVNLSSRPIPATPHQFGKLAGMLRGEQEVYHGISLKNFSTWLISAQPSRSVALLQEHDCPAQFVPNSRDYRAIERLHTQHIPTAVKYSGLAELEGFILPTFRIVVVTDREFFGQHVLATPGYIRKRRRATSKQVDLNKLRPGDYVVHKNHGVGKFLKLESWENREYLVVQYEDGLLRVPADALELLSRYRRTGDRAPTLNKMSGKAWERTKDKVRKSVKKLAVDLLGLYAKRSQLSGYAYPADDVWQEEMEDSFPYQPTPDQLKAIQDLKRDLESDSPMDRLVCGDVGFGKTEVAIRAIFKAINANKQVAFLAPTTILTQQHYHTLKERFAPYPINVGLLNRFRTTAERRDIHKRLATGELDVVVGTHQLLNKNVKFHDLGMLVVDEEQRFGVNQKEKIKSLKTQVDVLTLTATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLSSYDSEVVRTAIRNELDRGGQAFYVVPRVEGIEGVAAGLREMVPGARIAIAHGQMQEGELEATMLSFNNAEADLLVCTTIIESGLDIPRVNTIVIEDAQKFGLSQLYQLRGRVGRAGVQAHAWLLYPKQSKLSDVARKRLRALQEFTQLGSGYQLAMRDLEIRGVGELLGAKQSGQMESVGFDLYMSMLQEAIQEIQGSEIPQVEDTQVDLNLTAFIPADYIPDLEQKMDAYRAVASTTDGKELAQVAADWSDRYGSIPPAAQQLLRVIELKQLAKSLGFSRIKPEGKQHIALETPMEEPAWKLLQGNLPEHLQSRFVYSRGKVTVRGLGVLKVNQQLENLIDWLGKMQGALPEPAVTSS*