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sw_8_scaffold_856_15

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 10933..12360

Top 3 Functional Annotations

Value Algorithm Source
rhlB; ATP-dependent RNA helicase RhlB (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 143.0
  • Bit_score: 66
  • Evalue 2.50e-08
Uncharacterized protein n=1 Tax=Setaria italica RepID=K4A6T7_SETIT similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 460.0
  • Bit_score: 267
  • Evalue 2.00e-68
Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART03G00660.1}; TaxID=65489 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; P similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 451.0
  • Bit_score: 268
  • Evalue 2.20e-68

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Taxonomy

Oryza barthii → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1428
ATGGCGACGCGTATTGCAGCAGCGAGACGGTTCGCGAAGCCAGCGGCCAAAAAGCGGAGAAGCAAGGAAGAGTCTGAGGCAGACGAGCTACTCTTTAATCAGCGAAACGCGCCTCAGCGCAGTGGGCAATCGCAGCGCCGCCGTCAGCGCAGGCCTGATGAGAACGAGGCTGACTTCTTTGCACGCAGCGCTTCTTTTCAGGATGTCGGCGCTTATGAGGAGGTGGCTGGCGCTCTACGAGCGCTCGGGTACAAGGCGCCCAGTCACATCCAAGCGCTTGCATACGGACCCCTAGTTAATGCTTCTGACCGCTATGCTCTCCTCTGCGGCGAGCGCTCCTCCACCCGAAGTTCACCCTCGCCTTCATTGCTCATTGTTGTCCCTACCGAGGAGCTCCCCCAGCAGGTGCTCTCCACCTGCCGCTCCCTTGCCAAAGCTGGCGTTAAGTTCCGCAGCGTTGCCATCACCGGCCCCTCCGACTACGACACTGGCGAAACCCGCATGAAAACGCAAATCCAGTTCCTCAAAGAGGAGAACCTGGACGTTGTCATTGCCACACCTGGCCGTCTGCTCTCCTTCGCAGGCATGGGCTTAGTCGAGCTTTCACAAGTCGCCTCTGTTGTCTTCGATGAAGCGGACTTGCTTGCTTCTCGTGAGCATGGCTTTCATGACCAGCTCGTTGAGCTTGCTGGTGAGCTCTCGTCCCGCACACAGGTTGTTTTGGCCACCGCAACTATGCCAAAAGAGCAGCTGCCTTCTGTTGAGCGCATGTTTCCCAATCTGCGGATTATCTCCGGACCAAATGTCCACAAATCTGGTCAAAATATCAAACACAGCGTCATCGACTGCTCACTTGAATCTTCAGAAGGTGATGGCGCTCCAGAGGGCACTCTCAGAGCATCTACAGCTGCTTCGTCTCCAAACGAGGACAATGACTCCGCATGCGAGCTCAAACTCGCGCGGCTAGAGCGCGAATTACGGCGCGAGGGTGGCCAAACTCGAACAGTAATTTTCTGCAACTCGCTCGCAACATGCAGGCGGGTTGAGAACCGGCTGAGAAAAGGTGATAGAAAGGAAAAGGTTCGGCGGGTGCGAGCTGTGCACAGCGGATTGCGAAGAGAGCAGCGAGAAGCGAATATCGCGCTCCTGTGCAGCGCGGGCGATGACGACACAGACTTGCGGTCGCTCATCATTGTCACCACGGACCGCGCATCGCGTGGGCTGGACGTGTACGTGGATCAAGTTGTGCTCTTTGATTTGCCTGATTCACCATCAGAATTCATTAGGCGAGCGGGACGAGCTGCTCGCGGAACTCGGAAGAGTGCACGAGTAACGTGCCTTGCTGTTGGGGAGGAGCTAGCAATCGCAAGGCAGGTGATGGAGGCGTCGAACGCGCAAGGCTCGCCGCTCATGCAGACGCCTACGTAG
PROTEIN sequence
Length: 476
MATRIAAARRFAKPAAKKRRSKEESEADELLFNQRNAPQRSGQSQRRRQRRPDENEADFFARSASFQDVGAYEEVAGALRALGYKAPSHIQALAYGPLVNASDRYALLCGERSSTRSSPSPSLLIVVPTEELPQQVLSTCRSLAKAGVKFRSVAITGPSDYDTGETRMKTQIQFLKEENLDVVIATPGRLLSFAGMGLVELSQVASVVFDEADLLASREHGFHDQLVELAGELSSRTQVVLATATMPKEQLPSVERMFPNLRIISGPNVHKSGQNIKHSVIDCSLESSEGDGAPEGTLRASTAASSPNEDNDSACELKLARLERELRREGGQTRTVIFCNSLATCRRVENRLRKGDRKEKVRRVRAVHSGLRREQREANIALLCSAGDDDTDLRSLIIVTTDRASRGLDVYVDQVVLFDLPDSPSEFIRRAGRAARGTRKSARVTCLAVGEELAIARQVMEASNAQGSPLMQTPT*