ggKbase home page

sw_8_scaffold_8777_2

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(1454..2092)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halogranum salarium B-1 RepID=J3JD38_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 210.0
  • Bit_score: 280
  • Evalue 1.80e-72
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383, ECO:0000313|EMBL:EJN57151.1}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1210908 species="Archaea; Euryarchaeota; Halob similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 210.0
  • Bit_score: 280
  • Evalue 2.50e-72
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 203.0
  • Bit_score: 278
  • Evalue 1.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halogranum salarium → Halogranum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 639
ATGAGCCGACTCCGAACCTGGCAGGAACGAATCCGGGCACAGGACGCTACCGAGCGCAATCTCAAGCTCGCACTCGGGGAGATCGACCGGATGGGGAGTGCGCTCGATATTCCTCGTCCGGTTCGTGAGGCGGCGAGTATGTTGTACCGACGTGCGTTGGACGCCGATCTCGTTCGAGGGCGGTCCATCGAAGGGGTGGCTACCGCTGCACTGTACACGGCGACCCGGCAGGAAGACGTTCCCCGGAGCCTCGAAGAAGTGAGCAGTGTCGCGCGTGTCGAACGCAAAGAAATCGCGCGAACCTACCGATACGTGGCCAGTGAACTCGGACTCAATCTCGCACCTGTTGATCCGAAAAAGTACGCCCCACGGTTCTGTTCAGACCTCAACCTCTCAGAGGCCGTTCGGATGGAGGCAGAGCGGATTATCGATTCGACCGTCGACGAAGGCGTACTCTCCGGGAAATCACCGGTCGGCTTCGCGGCGGCCGCAGTCTACACAGCCGCGCTCGAACACGACGAAGAGCGAACGCAGAAAGCGGTTGCCGAAGTCGCCCGAGTAACTGCCGTGACCCTGCGGAACCGGTATCGAGAACAGGTCGAGCTGTTGGACGAACTGGACCAGAGTCCCTCTTGTTGA
PROTEIN sequence
Length: 213
MSRLRTWQERIRAQDATERNLKLALGEIDRMGSALDIPRPVREAASMLYRRALDADLVRGRSIEGVATAALYTATRQEDVPRSLEEVSSVARVERKEIARTYRYVASELGLNLAPVDPKKYAPRFCSDLNLSEAVRMEAERIIDSTVDEGVLSGKSPVGFAAAAVYTAALEHDEERTQKAVAEVARVTAVTLRNRYREQVELLDELDQSPSC*