ggKbase home page

sw_8_scaffold_86_21

Organism: SW_8_Halobacteriales_67_36

near complete RP 34 / 55 MC: 4 BSCG 30 / 51 MC: 1 ASCG 36 / 38
Location: comp(16643..17284)

Top 3 Functional Annotations

Value Algorithm Source
Bacterio-opsin activator HTH domain protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZYM5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 219.0
  • Bit_score: 198
  • Evalue 6.80e-48
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ELY90702.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altu similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 219.0
  • Bit_score: 198
  • Evalue 9.50e-48
putative DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 219.0
  • Bit_score: 194
  • Evalue 3.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natrinema altunense → Natrinema → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 642
ATGTCATCCGGCTTTCGTGCGGAGCTCCGAGTTACTGACCCGCCAGACTGTCAGGTAGCGGCCGCCACGGCGGAGACTGGTGACGCGTCTGCCGTCGCGTGGGGCGGCGACGGGACGACGGTCACCGAGGAGGGGACGATGCCCGCCGACAGCGACCCGGCCGGAATGGAGGAGGTGTTCTCGGACGGCGACCGGAGCGTTTACCGCTTCGACCGACCGGCCGATCAGGACTGCATCTGTGAGGTGATCGAACGGCACGGCGCTCCCATCCGAGACGTGCGCAGCGAGGACGGCACGCTCCTGCTCGCCTTCCACGTCCGCGACGTGGCGACACTCCGCGATGCGGTCGCGGCGCTCCGCGAGACGACCGACGGCGTCTCGCTCGTCCGACTCACGCAGTCCGCCCCCGCGGGCGACGACCGCAACCTCGTGCTCGTCGACAGAGCGGCGCTGACCGACCGCCAGCGCGAGGTGTTGGAGACGGCTCACGACCTCGGCTACTTCGCGCGGCCGAAGGGGGCCAACGCGACGGAGGTGGCGGCCGAACTCGACATCTCGCGGTCGACGTTCGCGGAGCATCTCGCGGCCGCCCAGTCGAAGCTCTTCGACGCCGTGTTGGACCACGACGCCGCGGGTGTCTGA
PROTEIN sequence
Length: 214
MSSGFRAELRVTDPPDCQVAAATAETGDASAVAWGGDGTTVTEEGTMPADSDPAGMEEVFSDGDRSVYRFDRPADQDCICEVIERHGAPIRDVRSEDGTLLLAFHVRDVATLRDAVAALRETTDGVSLVRLTQSAPAGDDRNLVLVDRAALTDRQREVLETAHDLGYFARPKGANATEVAAELDISRSTFAEHLAAAQSKLFDAVLDHDAAGV*