ggKbase home page

sw_8_scaffold_140_21

Organism: SW_8_Halorubrum_68_21

near complete RP 32 / 55 MC: 4 BSCG 28 / 51 MC: 1 ASCG 37 / 38
Location: 25749..26069

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 234
  • Evalue 6.00e-59
DNA-directed RNA polymerase subunit n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJJ9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 234
  • Evalue 4.30e-59
transcription factor TFIIS similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 108.0
  • Bit_score: 214
  • Evalue 1.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum tebenquichense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 321
ATGAAGTTCTGCGACGAGTGCGGATCCATGATGAAATCCGGCGAGGACGAAGACCACTGGGTGTGCGGCTCCTGCGGCCACGAGATCGGGCGCGACGACGGCGACGACGAGTGGACGACCCAGTCGCAGGTCGAGTCCGAGGTCGTCGACGTGAGCGACGCGGAGGACAAGGGGCTACCGACGACGACCGCGCAGTGCCCCGAGTGCGACAACGACCAGGCGTACTGGTACATGCAACAGATCCGCGCGGCCGACGAGTCCGAGACGCGCTTTTTCGTCTGTACCGAATGCGAACACAAGTGGCGCGAAGACGACCACTGA
PROTEIN sequence
Length: 107
MKFCDECGSMMKSGEDEDHWVCGSCGHEIGRDDGDDEWTTQSQVESEVVDVSDAEDKGLPTTTAQCPECDNDQAYWYMQQIRAADESETRFFVCTECEHKWREDDH*