ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_8_scaffold_311_18

Organism: SW_8_Halobacteriales_65_20

near complete RP 34 / 55 MC: 3 BSCG 31 / 51 MC: 1 ASCG 38 / 38 MC: 1
Location: comp(18778..20439)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7W6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 535.0
  • Bit_score: 456
  • Evalue 4.70e-125
Type II secretion system protein E {ECO:0000313|EMBL:ELZ30249.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carl similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 535.0
  • Bit_score: 456
  • Evalue 6.60e-125
ATPase, type IV secretory pathway VirB11 component like protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 568.0
  • Bit_score: 431
  • Evalue 3.50e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1662
ATGAGTGAGCCAGCTGAGACCACAGGGGCGACGTCGCCCGACGGGTCGGCGTCGTTACCGCTCGATCCGGCCGATAGCGACCGGACCGACGGGGAACCGCTCGACGAGCGTACGCGGGAGCTCCTCGTTCCGATGCGCACCGAGCTCGGCGAAGCGGAACTCGACGACGCCGTCGAGATCACCGAGCGGTACTGGCTCGTCCGACCGTTCGCGTTCGCCGTCATCCTGCGTGACACGCAGACCGACGAGTACAGCTACCACGTCGTCGAGCCGGAGCTCGACGAGCACGAACACTACGTCTACCGCGAACTCGAACGGGAGCTTCGGGAACATCTCGTCCACCGCGCGACGACGGGCGAGGACGAGCGCGAACGCGAGTCGATGCTCGAGAGACAGGCCCGCCGCGTCATCGACGAGCTGCCGGGACTCGACGTGCCCGAGCCGTCGTTCCGACAGATCTGCTACTACCTCCAGCGTAATCTCGTCCGTTTCGGGAAGATCGATCCGCTCATGGCCGATGCCCGGCTGGAGGAGATCTCGTGTAACGCGCCCGACAGCCCCGTCTTCGTCTACCATCGCGACTACGAGGACCTCGCGACGAACGTCGAGTACGAGACCGACGAGCTCCGGTCGTTCATCAAGACGCTCGCACAGCGCTCGGGAAAGGACATCTCGACGGCGAAGCCGATGCAGGGGACCGCGCTTCCCGACGGCTCGCGGATCCAGCTCACGCTGGACGAGGTGGCTCCACGCGGCGAGAACTTCACGATCCGGAAGTTTCGCGACGTTCCGTTCACGCCGATCGATCTGGTCCGGCTCGACACGTTCACCGTCGATCAGCTCGCGTATCTGTGGAGCTGTATCGACGCCGGCCTGTCGGGGATCGTCGCCGGGGGAACCGCATCCGGAAAGACGACCGCACTCAACGCCTTATCGATGTTTCTCCCGCCGAAATCGAAGGTCGTCTCCATCGAGGACACCCGCGAGCTGCAGATCCCACAGGAGAACTGGGTCGCCTCGCTCACGCGCGAGCCGATGTCCGGCGACGGCGAGACGGGGATCGACATGTTCGATCTGCTCCGCGGCGCGCTCCGGCAGCGTCCGGAGTATATCCTCGTCGGTGAGGTCAGAGGCGAGGAGGCCCGCGACATGTTCGAGGCGATGTCCACGGGACACACGACCTACTCGACGTTTCACGCCGATCGGGTCGAGGCCGTCCTGAACCGCCTGCAGGGACCGCGGATGGGCGTCGAGACGGAGCTCATCTCGGAGCTGGGCTTCCTCTGTTTTCAGGCGCAGGTCGGGACGGAGAGCGAGCGCCGCAACACCGAGATCGCGGAGGTGCTCGACATCGAGGGCGGTCGGCTGAAGACGCGCACCGTCTTCGAGTGGAGCGAGACCGACGACACCATCGAACAGGTGAACCGCTCGGCCCAGATGGCGAGTCTCAGACAGGAGCGACCGGCGATCGACGAGCGAACCGAGCGTCGCCGGGAGCTACTCGCGTATCTCGTCGCCGAGGATATCAGCGGCTACGAGCCCGTCGCCGCCGCGGTTCGGGCCTTCGAGCGGTCGCCCGATCGCGTCATCGAGCAGGTCCGCGCCGAGACGCTCGACGCCGAGACGCTCCGGCGGATCGAGGGGGACGGAGATGGCACGTAG
PROTEIN sequence
Length: 554
MSEPAETTGATSPDGSASLPLDPADSDRTDGEPLDERTRELLVPMRTELGEAELDDAVEITERYWLVRPFAFAVILRDTQTDEYSYHVVEPELDEHEHYVYRELERELREHLVHRATTGEDERERESMLERQARRVIDELPGLDVPEPSFRQICYYLQRNLVRFGKIDPLMADARLEEISCNAPDSPVFVYHRDYEDLATNVEYETDELRSFIKTLAQRSGKDISTAKPMQGTALPDGSRIQLTLDEVAPRGENFTIRKFRDVPFTPIDLVRLDTFTVDQLAYLWSCIDAGLSGIVAGGTASGKTTALNALSMFLPPKSKVVSIEDTRELQIPQENWVASLTREPMSGDGETGIDMFDLLRGALRQRPEYILVGEVRGEEARDMFEAMSTGHTTYSTFHADRVEAVLNRLQGPRMGVETELISELGFLCFQAQVGTESERRNTEIAEVLDIEGGRLKTRTVFEWSETDDTIEQVNRSAQMASLRQERPAIDERTERRRELLAYLVAEDISGYEPVAAAVRAFERSPDRVIEQVRAETLDAETLRRIEGDGDGT*