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sw_8_scaffold_151_17

Organism: SW_8_Halothece_sp_44_16

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(15646..17214)

Top 3 Functional Annotations

Value Algorithm Source
Choline/carnitine/betaine transport n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GU87_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 475.0
  • Bit_score: 589
  • Evalue 3.30e-165
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:KGE05173.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rub similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 508.0
  • Bit_score: 590
  • Evalue 2.10e-165
choline/carnitine/betaine transport similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 475.0
  • Bit_score: 589
  • Evalue 9.40e-166

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Taxonomy

Pseudohaliea rubra → Pseudohaliea → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGTGTCGTTCCTCTCCTCTAGACCGATTCCTAAATGCAATGGAACCCTGGGTATTTTTACCCGCAGCGGCCATTGTTATCGGCTTTGTTATTTTTGGAGGTTTTTTTACTGAAACTGCGAAACAGAGTTTCGAAACCTTACAGTCGAGCATTGTGGAAAACTTTGGTTGGTTCTATATTCTCACAGCCACAGCTTTACTCATTTTCATTGTCTGGCTGTTGTTTTCGCGGTTTGGCCGCATTCGGTTGGGCACCCCCGATAGTCGTCCTGAATTTGGGTATTTAAGTTGGTTCAGTATGCTAGTCAGTGCCGGCATGGGGATTGGCATTGTTTTCTTCGGGGCGGCGGAACCCATGCTGCATTTTCTCAATCCACCAAGCGGAGAAACGGAAACAACCGCTTCTGCCCTCCGAGAATCCATGCGTTTTACCTTTTACCACTGGGGATTCCATCCTTGGGCCATTTATTCAGCACTGGCGTTGCCGTTAGCTTATTTTCACTTCCGTCACGGTCTTCCCTTAGCCCCGCGATCGCTGTTGTATCCGCTTTTAGGAGATCGCATCCGGGGCGCGCCTGGTCATGCGGTGGATGTGCTGTGCACTGTGGGAACTTTGTTTGGGGTGGCCACTTCCCTGGGGTTAGGTTCCCAACAAGTTAATGCCGGTTTAAACTTTTTGTTTGGGATACCGCAAGAGACCCGATCGCAGTTGATTCTCATTGCAATTATCACAGCTGTGGCAACCATTTCTGTAATGTCTGGGCTTCATCGCGGGATCCAATTTCTAAGCCGATTTAATATTATTCTCACCATTGTCATCTTTGCCTTTGTGCTCATTACAGGACCCACAGTTTTTGTTTTGGAAGTCTTTACCGATGGCTTAGGCTATTACATTCAAAACCTTCCCTTTACCAGTTTTCGGATTAATCCCGAACCGGATGCCGAGTGGCAAGCGAACTGGACCCTATTTTACTGGAGTTGGTGGATCTCTTGGTCGCCTTTTGTCGCCGTATTTGTTGCTCGCATTTCTAAAGGACGCACCATTCGCTCTTTCATTCTGACTAACTTGTTGGTTCCGAGTTTGAGCGGGTTTCTTTGGTTTGCCGTCATGGGCGGCACTGCCATCCATCAAGAATTATATGGCCCAGGGGGAATTGCAAAACAAATCCAGGAAAATGACGCTTTAGCCCTATTTGCAGTTTTGGAAAACCTTCCCTTTCATGTGTTGATGTGGGGATTAGCGACATTGCTGACCATTATCTTTTTCGTGACTTCCTCTGACTCAGGTTCTTTGGTCGATGACATGGTGACATCAGGCGGACACCCCAACCCGCCAAGAGTGCAACGCTTGTTTTGGGCGCTGGCAGAAGGAACGGTTGCTGCAACGTTACTCTACTTTGGGGGATTGCAAGCCCTACGCACTGCTTCTTTAACCACCGGCATCCCGATCGCGATCTTTCTGTTAATCTCGAGTTATGGCTTGTGGCGGGCCTTAAAAGTGGATAGTTCCACCAGTGGCGTTCCTGAAAAAGAGGAATTGCAACAAGACGTTAAAACACCAGAGAAATAA
PROTEIN sequence
Length: 523
MCRSSPLDRFLNAMEPWVFLPAAAIVIGFVIFGGFFTETAKQSFETLQSSIVENFGWFYILTATALLIFIVWLLFSRFGRIRLGTPDSRPEFGYLSWFSMLVSAGMGIGIVFFGAAEPMLHFLNPPSGETETTASALRESMRFTFYHWGFHPWAIYSALALPLAYFHFRHGLPLAPRSLLYPLLGDRIRGAPGHAVDVLCTVGTLFGVATSLGLGSQQVNAGLNFLFGIPQETRSQLILIAIITAVATISVMSGLHRGIQFLSRFNIILTIVIFAFVLITGPTVFVLEVFTDGLGYYIQNLPFTSFRINPEPDAEWQANWTLFYWSWWISWSPFVAVFVARISKGRTIRSFILTNLLVPSLSGFLWFAVMGGTAIHQELYGPGGIAKQIQENDALALFAVLENLPFHVLMWGLATLLTIIFFVTSSDSGSLVDDMVTSGGHPNPPRVQRLFWALAEGTVAATLLYFGGLQALRTASLTTGIPIAIFLLISSYGLWRALKVDSSTSGVPEKEELQQDVKTPEK*