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sw_8_scaffold_162_23

Organism: SW_8_Halothece_sp_44_16

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(21886..22875)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 327.0
  • Bit_score: 568
  • Evalue 5.40e-159
tRNA-dihydrouridine synthase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCC0_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 327.0
  • Bit_score: 568
  • Evalue 3.90e-159
nifR3 family TIM-barrel protein similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 327.0
  • Bit_score: 568
  • Evalue 1.10e-159

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGATAGCAACCCTGCAACAAACAACACCGCTTAAAATTGGTTCAGTGAAAGTGAACAGCCGTGTTTTACAGTCGCCGTTATCTGGGGTAACCGATATGGTATTTCGTCGTTTAGTGCGACGTTATGCCCCTGACTCCATGCTTTATACGGAGATGGTGAAAGCGAAAGAAATCCATCATCTGCGAGAGTTGCCCCAAGTGATGAATATTGCCCCCGATGAAAGTCCAATTAGTATTCAATTATTTGACTCTCGTCCCGATTTTATGGGAGAAGCAGCGCAAAAAGCGGTTGCCGAAGGGGCGCAAACCATCGATATCAATATGGGATGTCCCGTCAATAAAATTACTAAAAAAGGAGGCGGTTCCTCTCTACTGCGTCAACCAGAGGTAGCCGAAGCGATTGTGGCAAGTGTGGTTGAGGCGGTGGAAGTGCCGGTTTCGGTTAAAACCCGCATCGGTTGGGATGAAACTGACATCAATATCCTGGAGTTTGCCCAACGGCTAGAAAATGCTGGGGCACAAATGCTAACGCTGCATGGCCGCACGCGATCGCAAGGCTATCAGGGAAACGCCCAATGGCATTGGATTAAACAGGTTAAACAGATTTTATCGATTCCCGTCATTGCCAATGGCGATATTTTTTCCGTTGAGGATGCAGTTCAGTGTTTAGAAGAAACCAACGCCGATGGTGTCATGTGTTCCCGGGGAACTTTAGGCTATCCCTTTTTAGCGGGCGAGATTGATCATTTTTTGAAAACCGGCGAAAAACGTCCGCAACCCACACCTGGGGAACGGTTAACTTGTGCCAAACAACATTTACAGGGATTATGGGAATATCGCGGCGATCGCGGCATTTATCAATCGCGCAAACATCTGGCATGGTATGCGAAAGGATTTCCCGGTGCCGCCCAATTGCGGGATAATCTCTCCCAAATTCAAGGGTTAGAAGAAGGGTTAATGCTTCTTGATGAGGCAATTAGCCAGCAATAA
PROTEIN sequence
Length: 330
MIATLQQTTPLKIGSVKVNSRVLQSPLSGVTDMVFRRLVRRYAPDSMLYTEMVKAKEIHHLRELPQVMNIAPDESPISIQLFDSRPDFMGEAAQKAVAEGAQTIDINMGCPVNKITKKGGGSSLLRQPEVAEAIVASVVEAVEVPVSVKTRIGWDETDINILEFAQRLENAGAQMLTLHGRTRSQGYQGNAQWHWIKQVKQILSIPVIANGDIFSVEDAVQCLEETNADGVMCSRGTLGYPFLAGEIDHFLKTGEKRPQPTPGERLTCAKQHLQGLWEYRGDRGIYQSRKHLAWYAKGFPGAAQLRDNLSQIQGLEEGLMLLDEAISQQ*