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sw_8_scaffold_38_14

Organism: SW_8_Halothece_sp_44_16

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(15016..16002)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y6K9_HALP7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 2.70e-173
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 7.70e-174
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. ( similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 3.80e-173

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Taxonomy

Halothece sp. PCC 7418 → Halothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCCCACTGCAAAACTAGACCAAAACAACGATAAACCCATCTTCTCTGCAGATATGGTGCGTACCTATCTCCACGAGATAGGCCGTGTTCCCCTGCTAACCCATGAGCAAGAGATTATTCTGGGCAAACAAGTGCAGAAGATGATGGGACTCCTAGAACAGAAAGAAGAATTAGAAAAAGAACTGGGACGGGAAGCCACTGACGAAGAATGGGCAGAACGCGCCGGCATGAGCGTCTCAGAAATTGAGAAAGCGATGAAAGCCGGCAACCGTGCCAAACGCAAAATGATTGAAGCCAACTTGCGTTTGGTAGTGGCGATCGCGAAAAAATACCAAAAGCGCAACATGGAATTCTTGGACTTGATCCAAGAAGGAACATTAGGGCTAGAGCGAGGTGTGGAAAAATTTGACCCAACCCGCGGGTATAAATTCTCCACCTATGCTTACTGGTGGATTCGCCAAGCGATTACTCGCGCGATCGCGCAACAAGCTCGCGCCATTCGCTTGCCCATTCATATTACAGAAAAACTCAACAAAATTAAGAAGGTACAACGGGAACTCGCGCAAAAACTTGGACGCAATGCCACGCCCACCGAAATTGCTGAAGAATTGGGACTAGAACCGTCACAAATTCGAGAGTATTTAAGCATTGCCCGTCAGCCCATTTCCCTGGATGTGCGTGTTGGCGACAATCAGGACACTGAATTGTCCGAGCTGTTAGAAGACGACGAAAACTCTCCCGAAACCTATCTAACGCAAGAGTCAATGCGCCAAGACATTGATTCCATGCTCTCGGAATTAACCCCCCAACAGCGTGAAGTTCTCTCATTGCGTTTTGGGTTAGAAGATGGCAACGAACTGTCTTTGGCCAAAGTTGGGAAAAAGCTCAATTTAAGCCGAGAGCGGGTTCGTCAATTGGAACACCAAGCTTTAGCAAAGCTCCGCAGACGGCGAGCAGGGGTGCAAGAGTACATTGCCGCGAGTTAA
PROTEIN sequence
Length: 329
MPTAKLDQNNDKPIFSADMVRTYLHEIGRVPLLTHEQEIILGKQVQKMMGLLEQKEELEKELGREATDEEWAERAGMSVSEIEKAMKAGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKIKKVQRELAQKLGRNATPTEIAEELGLEPSQIREYLSIARQPISLDVRVGDNQDTELSELLEDDENSPETYLTQESMRQDIDSMLSELTPQQREVLSLRFGLEDGNELSLAKVGKKLNLSRERVRQLEHQALAKLRRRRAGVQEYIAAS*