ggKbase home page

sw_8_scaffold_1203_4

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: 2832..3191

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 165
  • Evalue 3.60e-38
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 165
  • Evalue 6.50e-38
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 116.0
  • Bit_score: 152
  • Evalue 6.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 360
GTGGGTGAGATCGCCGACGTCGCACGTGCCTCCGAGGCCGAACTCAAGGCCGCCTACGACGCGCTCAATCGCGAACTCGGTCTCCCTACTGGGCCGATCGACCCGGCCGAATACATCGGTCGCTTCGCGAGCCAACTCGACGTCCCGAAGGCCGTCGAGGCACGCGCACGCGAGTTCGTGACCGAAGGGCGCGAGCGCGGACTGATCAACGGGCGCAACCCGAGCGGCTTTGCCACCACCTGTCTGTACGCCGCGGCGATCGAGGCCGATCACGACCTCACCCAGCGCGAAGCCGCCGACGTCGCGGGTGTCACTCCCGTTACGCTTCGGACGGCGTACTACGACCTGATCGAGGAGTGA
PROTEIN sequence
Length: 120
VGEIADVARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASQLDVPKAVEARAREFVTEGRERGLINGRNPSGFATTCLYAAAIEADHDLTQREAADVAGVTPVTLRTAYYDLIEE*