ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_8_scaffold_1378_2

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: comp(617..1936)

Top 3 Functional Annotations

Value Algorithm Source
MmgE/PrpD n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NTM5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 382.0
  • Bit_score: 346
  • Evalue 3.20e-92
MmgE/PrpD {ECO:0000313|EMBL:EMA60938.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 382.0
  • Bit_score: 346
  • Evalue 4.50e-92
2-methylcitrate dehydratase similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 289.0
  • Bit_score: 255
  • Evalue 2.70e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum litoreum → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1320
ATGACGAATCACGATATCGCGGTAACTGATCGAGACGCCGCGGCGAAACTCGCGCGCCACGCGATCGAATCGCGTGAGCGAACGCTTTCCGAAGAGGTCCGCTCGCAGTTGAAACGCCACCTGCTCGACTTTCTGGGCGTATCGCTCGGCGCGCGCGCCCACGCCCGTTCGACGCCCACGTTCGAGGACGCGATCGACACGCTCGCCGGGTCGAGTACCGGAGTCAACAGAAGCGTCGATAACGGCGAGGCGACGCTTCCCACGGACGGGTCGCGGGAATCAGCTGAACACGCCGCGCTCGCGAACGGCGCGCTCGCGCACAGCCTCGACTTCGACGACACCCATCGCGAGTCCTCACTGCACCCGGGCGCACCGGTGATCCCCGCCGCACTGGCGATCGCCGAACGCGACGGGGCGAGCACCGAGGAGCTGTTGGGGGCGATCTCGACGGGCTACGACGTCGCCTGTACCGTCGGCCGGGCAGTGAACCCCGATTCGCATTACGACAGGGGCTTTCACGTCACGGCGACCTGTGGTACCTTCGGCGCGACCGCCGCGGCGGGCGTCGTCGCTGGACTGGGTAGTGAGGGGATCGAAGCGGCGTTCGGCGTCAACGCGAGTCAGGCGGCTGGCTCGCTCGGCTTCCTCGAAAACGGCGCGTGGAACAAACGTCTGCATCCAGGTCTGGCCGCCCGTCGGGCCGTGCTCGCAACGGCGCTCGCAGAAGGCGGCTTTCGGGGCGCGGCCCGCCCCTTCGAGGGCGAGCACGGCTTCCTCCAGGGGTACTCCGACGATCCTGCCCCTGAGAACTTCGACCGGGTAGGTGAGCCGCCCGCCGTCACTGAGACGGCGCTCAAGCCCTATCCGTGCTGTCGGTACATGCACCCGGCGCTCGACGCGCTCACTGATATCGGACCGGACGTCGATCCCGAGGACGAGGGGGCGGCGGACCTGCCGGCCTTCCTCGGCGCTCAGGACCGACTCGACGACCCGACTTTGGAGGAGTTGATGGACGCGACCGAGGTCGTGACGACCGACGAAGTAGCCGAGCACTTCCCCGAACAGTGGACCGCGCGCGTCACTGTCACGACGAGCGAGGGCGAGTACGATCGGTTCGTCGAGACGGCTCGTGGCGAACCCGAGAAACCCCTCCGGTGGGAGGGCGTGGTCGAGAAGTTCGAAACCACCGGAACGTCGGCGGGCCTCTCGGCCGGCGAGTGCGAAGCGATCGTCGACGTAGTGGAGGAGATAGAGGCATACGAACTCGCCGACCTGACCGACGCGATCGGGCGTGCGCTCGCGCCGACGGCACGGAGCTAG
PROTEIN sequence
Length: 440
MTNHDIAVTDRDAAAKLARHAIESRERTLSEEVRSQLKRHLLDFLGVSLGARAHARSTPTFEDAIDTLAGSSTGVNRSVDNGEATLPTDGSRESAEHAALANGALAHSLDFDDTHRESSLHPGAPVIPAALAIAERDGASTEELLGAISTGYDVACTVGRAVNPDSHYDRGFHVTATCGTFGATAAAGVVAGLGSEGIEAAFGVNASQAAGSLGFLENGAWNKRLHPGLAARRAVLATALAEGGFRGAARPFEGEHGFLQGYSDDPAPENFDRVGEPPAVTETALKPYPCCRYMHPALDALTDIGPDVDPEDEGAADLPAFLGAQDRLDDPTLEELMDATEVVTTDEVAEHFPEQWTARVTVTTSEGEYDRFVETARGEPEKPLRWEGVVEKFETTGTSAGLSAGECEAIVDVVEEIEAYELADLTDAIGRALAPTARS*