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sw_8_scaffold_2078_2

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: comp(617..1336)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9A7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 233.0
  • Bit_score: 381
  • Evalue 8.30e-103
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 233.0
  • Bit_score: 381
  • Evalue 1.20e-102
Transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 233.0
  • Bit_score: 376
  • Evalue 4.40e-102

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 720
ATGATGCACGACAAGGGACTGTCGAGTCAGATCGGCTGGCAGAACAAGGACGCCTACGGCAACGCGCTGAGTGCACGCAAACGCCAGCAGATGCAACGGCTTCGTACCTGGGACGAGCGCTTTCGCACCCGGAACTCGAAGGAGCGCAATCTCAAACAGGCTCTCGGCGAGATCGAGCGGATGGCTTCGGCGCTCGGCCTCAGCCAGGACGTCAAGGAGACCGCGAGCGTGATCTATCGCCGGGCACTGTCCGAAGACATGTTGCCGGGACGCTCGATCGAAGGTATCGCGACCGCGGCGCTGTACGCGGCGGCCCGTCAGTCCGGCGTGCCCCGAAGCGTTGACGAGGTCGCCGCGGTCTCCCGAGTGGACGAGATGGAGTTCAAGCGCGCCTACCGGTACGTCGTCCGCGAACTCGGCCTCGAAATCGCACCCCCCAATCCCGACGAGTACCTACCCCGCTTCGCCTCCGACCTGGGTGTCAGCAACGAGACCGAGGCCCGCGCCCGCGAGTTGCTCCGAACGGCCGCCGAGCAGGGCATCCACAGCGGCAAGAGCCCGGTCGGCTTGGCCGCAGCCGCGCTCTATGCGGGAGCCTTGTTGACCAACCGGCAGATCACCCAGGACGAGGTAAGCGAGGTCGCCGACGTCTCGACCGTCACGATCCGCAATCGCTACCAGGAACTCTTAGAAGCTCAGGAGATCGGCGTCCCCGCCTGA
PROTEIN sequence
Length: 240
MMHDKGLSSQIGWQNKDAYGNALSARKRQQMQRLRTWDERFRTRNSKERNLKQALGEIERMASALGLSQDVKETASVIYRRALSEDMLPGRSIEGIATAALYAAARQSGVPRSVDEVAAVSRVDEMEFKRAYRYVVRELGLEIAPPNPDEYLPRFASDLGVSNETEARARELLRTAAEQGIHSGKSPVGLAAAALYAGALLTNRQITQDEVSEVADVSTVTIRNRYQELLEAQEIGVPA*