ggKbase home page

sw_8_scaffold_148_18

Organism: SW_8_Oscillatoriophycideae_48_13

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(19790..20344)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000367C251 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 235
  • Evalue 5.70e-59
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:ERT09937.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 186.0
  • Bit_score: 230
  • Evalue 2.50e-57
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 228
  • Evalue 1.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lyngbya aestuarii → Lyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAAAGTTCCACTAGAGATTTCCTATCGAGATATCGAGAAAACGGACGCTATTGATACATTAGTTCGCGAAAAAGCTGCCAAGCTCGAAGAATTCCACGGCGAGATTAATAGCTGCCGCGTGGCGCTCGAGAAGGAACATGACAGCCCAGATAGTGGTTCTCCCTACCGGGTGCGCATAGATCTCAGGGTTCCGCCTAGCCACGAGCTAGCTGTCACCAAAAATCCTGAAGAGAGTACCCAGTACGTGGAGCTAGAAACAGTCATACGAGAGGCTTTCGAGGCGGCTCGCAAACAACTTGTGAAGCTGAACGAACAGCAGCAAGGCGAAGTGAAGGAGCATCTCCAGGAAGAAATGGCAGCGGTGGTGAGTGAGCTGTTCCCAGAGCAAGGTTACGGCTTTCTCAGGAGCCTGCAAGAGGAAGAAATCTACTTCCACCGCAACAGCGTGCTACACAACGATTTTGATCGCCTAGAAGTTGGCACTGGTGTACAGTGCTTGGTAGAAGAGGGCGAGCAGGGTTCGCAAGCAAGCACTGTGCGGATTGTTAGTTAA
PROTEIN sequence
Length: 185
MKVPLEISYRDIEKTDAIDTLVREKAAKLEEFHGEINSCRVALEKEHDSPDSGSPYRVRIDLRVPPSHELAVTKNPEESTQYVELETVIREAFEAARKQLVKLNEQQQGEVKEHLQEEMAAVVSELFPEQGYGFLRSLQEEEIYFHRNSVLHNDFDRLEVGTGVQCLVEEGEQGSQASTVRIVS*