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sw_8_scaffold_3289_5

Organism: SW_8_Salinibacter_ruber_62_8

partial RP 26 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 1 / 38
Location: comp(2545..3258)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 236.0
  • Bit_score: 222
  • Evalue 8.90e-55
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 230.0
  • Bit_score: 270
  • Evalue 1.60e-69
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 236.0
  • Bit_score: 222
  • Evalue 1.80e-55

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 714
GTGTACCAGGCGTCGTCGCTCCCCTTGTCGCTCAACGACGGCGCAGTACTTCTCGTCGACAAGCCGACGGGGGCCACGTCGTTCGATGTCGTAAAAGCCGTTCGGGAGCGGGCTGGCCCGTCGAAAGTCGGTCACGCCGGCACCCTCGACCCGATGGCGACAGGGCTCCTGATTATCCTGGTTGCTCGTCCCGCGACGCGGTTGCAAGAGGCGTTCATGCATCTGCCCAAAACCTACGAAGGGACGATGCGATTGGGCGAGCGGACCCCGTCCCTCGACACGGAAACGGAGGTGGAAGAGCACGTCGACGTTTCGCACCTGTCGTTTGAGGACATTGCTGCCGTCCGCGACTCGTTTACGGGCCAGATTAATCAGACTCCGCCCATGTATTCGGCGGTGAAGGTGGACGGCGAGCCGCTCTACAAGAAGGCGCGTCGCGGCGAGACGGTCGAACGAGCGCCCCGGCAGGTGCGAATCGATCGGTTCGAGCTGCGGGACTGGACGCCACCGGATCTGACCTTTGCGATTGACTGCTCGAAGGGGACGTACATTCGCAGTCTCGCTCGGGACGTGGGAGCGGCGTTGGACGTCGGGGCTCATCTCGCGGCGCTGCGTCGCACCGCCATCGGCGAGCACCGGGCGGCGGACGCCTGGCCCCTTCCTGCGCTCAAGGATGCTCTTTCAGAAGCGACGACGGACCCTGATGAATCGTGA
PROTEIN sequence
Length: 238
VYQASSLPLSLNDGAVLLVDKPTGATSFDVVKAVRERAGPSKVGHAGTLDPMATGLLIILVARPATRLQEAFMHLPKTYEGTMRLGERTPSLDTETEVEEHVDVSHLSFEDIAAVRDSFTGQINQTPPMYSAVKVDGEPLYKKARRGETVERAPRQVRIDRFELRDWTPPDLTFAIDCSKGTYIRSLARDVGAALDVGAHLAALRRTAIGEHRAADAWPLPALKDALSEATTDPDES*