ggKbase home page

sw_8_scaffold_4604_3

Organism: SW_8_Salinibacter_ruber_62_8

partial RP 26 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 1 / 38
Location: 1382..4561

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 999.99
  • Bit_score: 1780
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=24659720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 999.99
  • Bit_score: 1779
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 999.99
  • Bit_score: 1780
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3180
GTGCAAGATGATGTCCCGCCCGAAGATCGAGAAAATGAGGGGCTTCAGCAGGTTTTCAATGAGCACTTTCCCATCAAGGACAGCCGGGAGCGCTACACGCTGGAGTTCGTGAACTACGAGCTCGATCCCCCTAAACACACAGTCCAGGAGTGCATGGATCAAGGGCTCACCTACACGGTCCCCTTGAAAGCGACGCTTCGACTCACCAGCAAGGAAGAGGACGGCGACGAGGAGGTTGTCGAAGCGATTGAGCAGGAAGTGTATCTCGGGACGCTTCCGTTCATGACGGAGCGGGGAACCTTTATCGTCAACGGAGCGGAGCGAGTCATCGTCTCCCAGCTGCACCGAAGTCCCGGTGTCTTCTTCGATCGGGAGTTTCACGACAACGGTACCGAGCTCTTCAGCGCCCGCGTCATTCCGTTCCGTGGGTCCTGGATGGAGTTTACGACGGATGTTCGAGATGTGCTCTGGGCCTACGTGGACCGGAAAAAGAAAGTGCCGGTCACGACCCTCCTCCGGGCGCTTGGCTACTCGAGCGACGAGGAGATTATTCGCATGTTTGGCCTCGCCGACTCGGTCGACATAAAGAGTGAGGAAGAGCTTCAAGGGTACCTCGGTCGTGAACTGGCTACCAGCGTCGCGATCGACAAGACCATTGAGATCGTCGATGAGGACACTGGCGAGGTTGTCGACGAGGAGAGCGAGCGGGAAGTGCTGCTTCCGGCCGAGCATGAGTTGGAGGAGGAAGACTGGGAGGTTTTGGAGGAGCACGACATCACTCGCGTGTATCTGATTCAGGAGGACATCGACGAAGGCGAGCTCGACAAGAGCACGCTCGTCGAGACCCTCAAGAAGGACTCCACGCACACCGAGGAGGAGGCGCTCAATCATCTATACCAGAAACTGCGCGGCAGCGAAGCGCCGGACCTCGACTCTGCTCAGGAGGCGCTCGACCGCCTGTTCTTCAACGAGAAGCGATACGACCTCGGTGAGGTGGGACGGCACCGTACCAACGAGCGCCTCGGGATTGACGTGGACGAGGACAAGCACGTACTGGCGAAGGAGGACGTGGTCGGCATCGTGCAGGAACTGGTTGCCCTTCAAAACGGGGAGAGTACGGCCGACGACATCGACCACCTCAGCAACCGCCGCGTGAAGTCGATCGGTGAGCAGCTGGGATCGCAGTTCTCCCTCGGCCTAGCCCGCATGGCCCGGACCATCAAGGAGCGGATGAACCTGCGGGACGCGGACAAATTCACGCCGAAGGATCTGGTCAATGCCCGGACGATCGAGAGCGTTATCAACACGTTCTTCGGGACCAACCAGCTCAGCCAGTTCATGGACCAGACCAATCCGCTGGCGGAGTTGACCCACAAGCGCCGGATGTCGGCACTGGGGCCGGGCGGATTGACGCGGGAACGCGCCGGATTCGAGGTGCGAGACGTGCACTACACGCACTACGGGCGGCTCTGCCCGATTGAGACGCCGGAGGGCCCGAACATCGGCCTCATGCTCTCGCTCTGCGTCCATGCTACGATCAACGACTTCGGCTTTCTCGAAACGCCGTACCGCGTGGCTGAAGACGGTCGGGTCACCGAGGAGGTCGAATATCTGACGGCGGACGAAGAGGACCAGGCCATCATTGCGCAGGCCAATGCCCCGATTGACGACGACGGCAACTTCCGCCGTGACGAGGTCCGTTGCCGGCATCAGGGGGACTTCCCGGTTGTGGAGCCGGAAGAGGTGCAGTACATGGACGTGGCGCCGAACCAGATTGTCTCGCCGGCGGCCAGCCTCGTGCCGTTCCTCTCGCACAACGACGCCAACCGGGCACTCATGGGGGCTAACATGCAGCGGCAGGGCGTTCCGCTGCTGCGCGGCGACTCCCCGATCGTTGGTACCGGCCTTGAAGGGCGGGCGGCCAAAGACTCCCGGGCCTGTATCGTCGCGGAAGGCGACGGGGAGATCGAATACGTGGATGCTGATCGCATCGTGGTCCGATACGACGAGGAGCAGGACGACACGGACCTCACATTCGGAGAGCCGGTTCGGGAGTACGAACTCACCAAGTTCCGTCGGAGCAACCAGGGCACCTGCATGAATCAGAAGCCCATCGTCCAGCAGGGCGATCGGGTGGAAGAGGGCGAGGTGCTCACCGATGGCTTTGCCACCGAGAAGGGGGAGATCGCGCTCGGCAAGAACGTGCTCTGTGCCTTTATGCCCTGGCACGGCTACAATTACGAGGACGCCATCGTCATCAGCGAGCGTCTCGTGGCCGACGACGTGTACACGTCCGTCCACATTGAGGAGTTTGAGCACGAGGTGCGGGATACGAAGCGCGGAGAGGAAGAGCTCACCCGTGAGATCCCGAACGTGAGCGAGGACCCGACGCCCGAGGAGAAGCTGCTCCGCGCCATCTTTGGCGACAAGGCCGGCGACGTAAAGGACGCCTCGCTGAAGGCCAAGCCGGGCATGGAGGGCGGCGTCGTGATCGACACCAAGCTTTTCAGCCGTCGTGAGCTGGATCCCGCCTCCAAGAAAATGGAGGAGAAGCGACTCGAGAACATCGAAGACGAGTATGAGCGGGAGATTGAAGACCTCGACGAGCGCTTCTGGGATAAATTCTTTGCGCTCGTGGAGGGCAAAACGACTGAGGGCATTGAGGACCGAGACGGCACGGTTGTCCTCTCTGAGGGCGCCGAGTTTGAGCGGGACGCCTTTGAGGATGTGGATCCCGCCGACCTCAGTCTGCGCCAGGCGTTTACCGACGACGAGGACCTGAACGCGAAGATCCAAACGCTGCTGCGGAACTACACCTCGCGTCGCCGCGATATTGACGGCAAGGCCAAGCGCGAGAAGCATCAGGTGGAAATGGGCGACGAGTTGCCCGCCGGCATCGTCCAGATGGCAAAGGTCTACGTGGCCCGCAAGAAGAAGATGGAGGTGGGCGACAAGATGGCGGGGCGCCACGGCAACAAGGGCGTGATTGCGAAGATTGCGCCGGTCGAAGACATGCCGTTCCTCGAAGACGGAACGCCGGTCGATCTTGTGCTAAATCCGCTGGGTGTGCCCTCGCGAATGAACCTGGGGCAGATTTACGAGACGCTTCTCGGCTGGGCCGGCGACAAGCTCGGTGTGAAGTATTCGACGCCGATTTTCGACGGCGCTTCGCTCGAACAG
PROTEIN sequence
Length: 1060
VQDDVPPEDRENEGLQQVFNEHFPIKDSRERYTLEFVNYELDPPKHTVQECMDQGLTYTVPLKATLRLTSKEEDGDEEVVEAIEQEVYLGTLPFMTERGTFIVNGAERVIVSQLHRSPGVFFDREFHDNGTELFSARVIPFRGSWMEFTTDVRDVLWAYVDRKKKVPVTTLLRALGYSSDEEIIRMFGLADSVDIKSEEELQGYLGRELATSVAIDKTIEIVDEDTGEVVDEESEREVLLPAEHELEEEDWEVLEEHDITRVYLIQEDIDEGELDKSTLVETLKKDSTHTEEEALNHLYQKLRGSEAPDLDSAQEALDRLFFNEKRYDLGEVGRHRTNERLGIDVDEDKHVLAKEDVVGIVQELVALQNGESTADDIDHLSNRRVKSIGEQLGSQFSLGLARMARTIKERMNLRDADKFTPKDLVNARTIESVINTFFGTNQLSQFMDQTNPLAELTHKRRMSALGPGGLTRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLMLSLCVHATINDFGFLETPYRVAEDGRVTEEVEYLTADEEDQAIIAQANAPIDDDGNFRRDEVRCRHQGDFPVVEPEEVQYMDVAPNQIVSPAASLVPFLSHNDANRALMGANMQRQGVPLLRGDSPIVGTGLEGRAAKDSRACIVAEGDGEIEYVDADRIVVRYDEEQDDTDLTFGEPVREYELTKFRRSNQGTCMNQKPIVQQGDRVEEGEVLTDGFATEKGEIALGKNVLCAFMPWHGYNYEDAIVISERLVADDVYTSVHIEEFEHEVRDTKRGEEELTREIPNVSEDPTPEEKLLRAIFGDKAGDVKDASLKAKPGMEGGVVIDTKLFSRRELDPASKKMEEKRLENIEDEYEREIEDLDERFWDKFFALVEGKTTEGIEDRDGTVVLSEGAEFERDAFEDVDPADLSLRQAFTDDEDLNAKIQTLLRNYTSRRRDIDGKAKREKHQVEMGDELPAGIVQMAKVYVARKKKMEVGDKMAGRHGNKGVIAKIAPVEDMPFLEDGTPVDLVLNPLGVPSRMNLGQIYETLLGWAGDKLGVKYSTPIFDGASLEQ