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sw_8_scaffold_15654_1

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: 2..838

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMJ6_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 278.0
  • Bit_score: 353
  • Evalue 1.60e-94
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 278.0
  • Bit_score: 353
  • Evalue 4.60e-95
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEI50967.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slith similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 278.0
  • Bit_score: 353
  • Evalue 2.30e-94

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 837
ACCAACCGGGACAGCGTTTCCCTTGAAAAGTACCTGAAGGACATCAGTAAAGTTGAACTCCTCGAACCGGAAGAAGAAGCAGAGCTGGCACGCAAAATTCAAGAGGGTGATGCGGAAGCCCTTGAACGATTAACGCGTGCTAATCTGCGTTTTGTTGTTTCGGTGGCCAAGCAGTACCAGAATCATGGCCTCCCGTTGAGCGATTTAATCAACGAAGGCAATCTGGGCCTCATCAAGGCAGCTGAGAAGTTCGATGAAAAACGCGGCTTTAAATTTATCTCCTATGCCGTTTGGTGGATCAGGCAGTCAATTATGCAGGCCCTTGTTGAACAGTCGCGCATAGTGCGCCTTCCGCTTAATAAAGTGGGTTCGTTCAATAAGGTAAGCAAAGCCATGAGCGATTTTGAACAACAGTACCAACGCGAACCAACAAATGAGGAATTAGAGGAAATTCTCGATATCGATAAAGACGAGATTAACGAAGTTGTAAAGTCAGCTGTCAGGCATCAGTCTACTGACGCCCCCATTACGAATGATGAAGAAAGTGGTACATTGTTGGATGTGCTTTCCCAGGATGAAACGACTGATGCTGAGCAAAACATGCTCGATAACTCGCTTAAACAGGAAATCAAGAGGGTGCTTTCTATCTTACCCTCTCGTGATTCGGAAATCATCAAGATCTATTTTGGTCTGGATGGCGGTGTGGGCTTAACCCTGGAGGAGATCGGCACGCAATTCGGGCTGACCCGTGAAAGGGTGCGTCAGATCAAGGAACGCTCCTTGAGGCGTTTGCGAAGAGCCACTTCGTCAAAGGCCCTTAAGAGCTATCTTAGCTGA
PROTEIN sequence
Length: 279
TNRDSVSLEKYLKDISKVELLEPEEEAELARKIQEGDAEALERLTRANLRFVVSVAKQYQNHGLPLSDLINEGNLGLIKAAEKFDEKRGFKFISYAVWWIRQSIMQALVEQSRIVRLPLNKVGSFNKVSKAMSDFEQQYQREPTNEELEEILDIDKDEINEVVKSAVRHQSTDAPITNDEESGTLLDVLSQDETTDAEQNMLDNSLKQEIKRVLSILPSRDSEIIKIYFGLDGGVGLTLEEIGTQFGLTRERVRQIKERSLRRLRRATSSKALKSYLS*