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sw_8_scaffold_15799_2

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: 1648..2169

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SNV2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 174.0
  • Bit_score: 198
  • Evalue 4.20e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 174.0
  • Bit_score: 198
  • Evalue 5.90e-48
RNA polymerase, sigma 70 subunit, RpoD subfamily similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 160.0
  • Bit_score: 191
  • Evalue 1.90e-46

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Taxonomy

uncultured Bacteroidetes bacterium → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGGGACAAAAAACTACACACGATACATATACAGATGGCGAACGAAGTATCCCGCTCGATGCCTACATCAAAGACATTGCAGCCAACCCTTTGCTCAATAAAGAAGCGGAAGCCGAGCTTGCCAAACGCATCAGGCAAGGCGATCGACAAGCGCTGAACAAGCTGGTTGTCTCCAATTTACGTTTCGTCATAAGTATTGCCCGTCAGTACCGCAACTACGGGTTGAGCCCGGAGGATTTGATCAACGAGGGAAATTTGGGCTTGATGGAAGCAGCTCATCGTTTCGATGAAACAAAAGGCTACAAGTTCATATCCTATGCCGTGTGGTGGATTCGCCGGTTTATCCTGCAAGCTTTGGCCGAGACCAATCGCACGATCCGTATTCCGCTCAATCGTATTGGTGATTTATCCAAAATCAATACGATCTTTTACACGCTGGAGCAAAAATACGGGCGCGAACCAACCGAAGAAGAACTGGGCAAGGCGTGGAATCTCAGTCCGCAAAAGGTTAAAGAAGCATAG
PROTEIN sequence
Length: 174
MGQKTTHDTYTDGERSIPLDAYIKDIAANPLLNKEAEAELAKRIRQGDRQALNKLVVSNLRFVISIARQYRNYGLSPEDLINEGNLGLMEAAHRFDETKGYKFISYAVWWIRRFILQALAETNRTIRIPLNRIGDLSKINTIFYTLEQKYGREPTEEELGKAWNLSPQKVKEA*