ggKbase home page

sw_8_scaffold_16334_3

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(1302..1616)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.; similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 103.0
  • Bit_score: 130
  • Evalue 1.60e-27
Pseudouridine synthase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JGV2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 103.0
  • Bit_score: 130
  • Evalue 1.10e-27
ribosomal large subunit pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 99.0
  • Bit_score: 127
  • Evalue 2.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroidetes oral taxon 274 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 315
GAGGTAAAACTGGATAAGCAACTTACCAAGCAGCATATGACGCAACTTCAGCAGGGCCTGTCCCTTGACGATGGCGAAGCGGCTGTGGATGCAATTGCTTTCCCGCAAGAAGACGATAAACGCCTGGTGGGTGTGGAGCTTCACATCGGAAAGAACCGGATAATCAGGCGGATGTTCGAGCATCTTGGCTACCGTGTTGTCCGTCTTGACCGGGTGCTTTTTGCCGGACTCACCAAGAAAAACCTCCCTCGCGGCAAGTGGCGTCATTTAAGCAAAAAGGAAGTAGGGCAGTTGAAGCGCTCGCTCCAAATGTGA
PROTEIN sequence
Length: 105
EVKLDKQLTKQHMTQLQQGLSLDDGEAAVDAIAFPQEDDKRLVGVELHIGKNRIIRRMFEHLGYRVVRLDRVLFAGLTKKNLPRGKWRHLSKKEVGQLKRSLQM*