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sw_8_scaffold_18068_1

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: 3..611

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 166.0
  • Bit_score: 142
  • Evalue 7.60e-31
Shikimate kinase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XU57_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 166.0
  • Bit_score: 142
  • Evalue 5.50e-31
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 166.0
  • Bit_score: 142
  • Evalue 1.50e-31

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ACGGGCAATGACTCATGAGCCTTACATGCCGTCAAGCAAACTGTTGGCCTGTTAAATCGTCAATGAACAATGGCAATCGATACAAACATTTATCTAATTGGCATGATGGGCAGCGGCAAAAGCTCCCTGGGCCACAAACTGAGCAAGCAGTTAGCCATCGATTTTATCGATCTGGATAAGCGAATTGAAGAGTGTGAGCAAAAATCTATCTCTGCACTTTTTCGCGAAGATGGTCAGCCCTATTTTCGCAAAGCAGAGACCGAATATCTGCGGCAAACAAAAAACGCTTGTGCTGTGATAGCCACTGGTGGCGGGGCTCCTTGCTTTCACGGGAACCTTGCGTGGATGAAGCAAAACGGGCTGACGGTTTATTTGCAAGTGGATGTTGCCACAATTGTCAACCGGCTCCAATCAAACGGCACGGAACGCCCCATGCTTGGCGACTTAGAGGGCCCGGCACTGACAAACTACATCAGCTCCTTGTTGGAAGAGAGGGAATCGTTTTATAAAAAAGCTGATATCATCTTTGACGGAAGCCGGCCCAAAGCGCAAGAAGCAGAGGTGGTGTTAGCTGAACAGATCGACCGTTTGCTTCACACACCGCAATAA
PROTEIN sequence
Length: 203
TGNDS*ALHAVKQTVGLLNRQ*TMAIDTNIYLIGMMGSGKSSLGHKLSKQLAIDFIDLDKRIEECEQKSISALFREDGQPYFRKAETEYLRQTKNACAVIATGGGAPCFHGNLAWMKQNGLTVYLQVDVATIVNRLQSNGTERPMLGDLEGPALTNYISSLLEERESFYKKADIIFDGSRPKAQEAEVVLAEQIDRLLHTPQ*