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sw_8_scaffold_18263_2

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: 133..1002

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 290.0
  • Bit_score: 456
  • Evalue 2.00e-125
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 290.0
  • Bit_score: 456
  • Evalue 1.40e-125
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 290.0
  • Bit_score: 456
  • Evalue 4.10e-126

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCATTAAAGACTGAAGAAACCAGCGAATTTGATTTTGAATCGGTCACTCTGAAACTCGCTTCTCCGGATTCGATTCTCGACCGTTCGAACGGAGAAATTGTAAAACCCGAAACCATCAATTACCGGACGTATAAGCCGGAGATGGGCGGGCTGTTCTGCGAACGCATTTTCGGCCCAACCAAGGACTATGAATGCTATTGCGGCAAATACAAGCGTATTCGCTACAAGGGCATCGTTTGCGACCGTTGCGGTGTGGAAGTGACCGAGAAAAAGGTTCGCAGGGAACGCATGGGCCACATCAAGCTGGTGGTACCCATTGTACACATATGGTACTTTAAGTCTTTACCCAATAAAATTGGCTATCTGCTGGGCTTATCTTCCAAGAGGCTGGAGTCCATTATTTATTACGAGCGCTATTTGGTTATACAAGCTGGCGCAGCAGCTGATTTTGAGACCTCCAAAGGCGAAAAGGTCGACTATCTTAGCCTGCTGAGCGAAGAAGAATACTTTGATCTCATGGAGCGGTTACCCAAAGAAAACCAGCAGCTCGATGAAGAGGATCCGAACAAATTCATCGCTAAGATGGGCGCAGAGGGCTTGCACGATGTCCTTTCGCGTATCATTTTGGATGAGCTAGCCACAAGTCTCCGCAATCAGGCAGCAACTGAGACGTCTCAACAACGGAAAGCTGAAGCGCTCAAACGTTTAGGTGTTGTGGAGTCATTCCGCGATGCCAACACGCGTGTGGAAAACAGGCCCGAATGGATGATTACACAATTTATGCCCGTGATTCCACCTGAGTTGCGCCCATTGGTTCCGTTGGACGGAGGTCGCTTTGCGAGTTCGGACCTCAACGACCTTTACAGG
PROTEIN sequence
Length: 290
MALKTEETSEFDFESVTLKLASPDSILDRSNGEIVKPETINYRTYKPEMGGLFCERIFGPTKDYECYCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIKLVVPIVHIWYFKSLPNKIGYLLGLSSKRLESIIYYERYLVIQAGAAADFETSKGEKVDYLSLLSEEEYFDLMERLPKENQQLDEEDPNKFIAKMGAEGLHDVLSRIILDELATSLRNQAATETSQQRKAEALKRLGVVESFRDANTRVENRPEWMITQFMPVIPPELRPLVPLDGGRFASSDLNDLYR