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sw_8_scaffold_29139_2

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: 597..1100

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FY99_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 151.0
  • Bit_score: 102
  • Evalue 5.20e-19
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 151.0
  • Bit_score: 102
  • Evalue 1.50e-19
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 151.0
  • Bit_score: 102
  • Evalue 7.30e-19

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
GTGTCCGGCGCACTTAAAGTTTTCTTTCATTACCCTTTCAAGGAAGATGCGCTTTTATACCTTCCCCACCTGTTCGTTGACGTAGTCTCACCACCTATTCCCTTTTTTATCGAATGGCTTACATCTGCGCCCCGGGAAGGTATTTACCACGTGAAATTCGAATCCACCACCGATAAGGAAGAAGCTACAACACTCGCCAACACAAATCTTTATCTAACCAAAGAAGAAATAAACCAATACTTTCTTGTACCGGAAAAGGATGTGCTCGCTTTAGACGATGACACCGAATTAACAGGTTTTACAATATCGGTCAGTAACCTTGGAACGATTGGCGCCATTGAAGAAGTTTATGAGATAGCAGAGCAATTGCTGGTACAAATTACCTACCAAGGGCAGGAAGTCATGATCCCGTTGAATGATGAAACCATCGAACAGGTTGATGATAATGAGAAGGTTATTTATGTAAATTTACCTGAAGGTCTGCTCGCTATCTACACAGAATAG
PROTEIN sequence
Length: 168
VSGALKVFFHYPFKEDALLYLPHLFVDVVSPPIPFFIEWLTSAPREGIYHVKFESTTDKEEATTLANTNLYLTKEEINQYFLVPEKDVLALDDDTELTGFTISVSNLGTIGAIEEVYEIAEQLLVQITYQGQEVMIPLNDETIEQVDDNEKVIYVNLPEGLLAIYTE*