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sw_8_scaffold_3826_3

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(1387..2820)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1524460 species="Bacteria; B similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 479.0
  • Bit_score: 610
  • Evalue 2.30e-171
mfd; transcription-repair coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 470.0
  • Bit_score: 586
  • Evalue 7.30e-165
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003624449 similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 474.0
  • Bit_score: 602
  • Evalue 4.60e-169

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1434
AAAGAAAAGACCGATATCCTCAAGCGGCTCAAAGAGGGCAAAATCGATATCCTCATCGGCACGCACAGCATCATTGGCAAGAATGTAAACTTCAACGATCTCGGCATGCTGATTATCGATGAGGAGCAAAAGTTCGGTGTGTCAGCTAAAGAGAAGTTGCGCGAAATGAAAGTCAACGTGGATACGCTCACGCTCACAGCCACTCCCATCCCAAGAACGCTCCAGTTTTCACTGATGGGCGCACGCGACTTATCCATTATCCAGACGCCACCACCGAACAGGCAACCCATCCACACCGAGCTTCACACCTTCAATGACGATGTGCTCAAAGAAGCGATTGAGGATGAGGTGCATCGCGGCGGGCAGGTCTATTTTATTCACAATCGGGTGCAGGAGATCGAAGCAATGGGCGACATGCTCAGGCGTATCTGTCCGCATATCGATTTCAGGATTGCGCATGGCCAGATGGATGGGAAAGAACTGGAGAACATTATGATGGGCTTTATCAGCCACGAATTCGATGTGCTCTTATCCACCAATATTGTGGAAAATGGGCTCGACATTCCCAATGTAAATACCATCATCATTAATAATGCCCACAAGTTCGGCCTGAGCGATCTTCACCAATTACGCGGGCGTGTGGGGCGCACGAACCGCAAGGCTTATTGCTACCTTTTCAGCCCTCCTTTATCAGCATTGCAGCAGGTAGCGCGCAAACGGCTTAAAACCATCGAGGAATTTTCGGAGTTGGGAAGTGGCTTTTCGATTGCCATGCGCGATATGGATATACGCGGGGCCGGCAACGTGCTCGGAGGCGAACAAAGCGGCTTTATCGCTGACATCGGTTTTGAGACGTACCAAAAAATCCTCGATGAGTCGATCCGGGAGTTGAAAGAAACAGAATTTAAAGATCTCTATCAGGAAGAGTTGGCGAAAAATAAGGAATACGTGCGCGAATGCCAGATCGACTCCGATATGGAAGTATGGCTGCCGGACGATTATGTGAATAGCGTGAATGAGCGCCTCAAACTTTATACCGAGCTCGATCACCTGGAAAATGAAGAGCAGCTCCGGGAATTTCGTAACAAGCTGAAAGATCGCTTCGGCCCGCTTCCCGAAGTTGTTGAAGCTCTATTTGATACCATCCGCATCCGGTGGGCTGCTAAGCAACTCGGGTTCGAGCGCATCGTGCTCAAGAACGGCAATATGAAGGGCTACTTCATCGGCAAGCAGGATTCACCGTTCTATCAATCTGCAACGTTTGGGAATGTCATGCAATACATCCAGGAAAACCAGTCGTTCTGCAATCTTAAGCAAACGGAGCGCTACCTCATCCTCACCATTGACAACATCACGTCAATGGCCGAAGCCAGAAGCCAATTGCAAAACATCGTAAAAGCGGTGGAAGCGGTGGCCTCAGCTACCGAAGGGTAA
PROTEIN sequence
Length: 478
KEKTDILKRLKEGKIDILIGTHSIIGKNVNFNDLGMLIIDEEQKFGVSAKEKLREMKVNVDTLTLTATPIPRTLQFSLMGARDLSIIQTPPPNRQPIHTELHTFNDDVLKEAIEDEVHRGGQVYFIHNRVQEIEAMGDMLRRICPHIDFRIAHGQMDGKELENIMMGFISHEFDVLLSTNIVENGLDIPNVNTIIINNAHKFGLSDLHQLRGRVGRTNRKAYCYLFSPPLSALQQVARKRLKTIEEFSELGSGFSIAMRDMDIRGAGNVLGGEQSGFIADIGFETYQKILDESIRELKETEFKDLYQEELAKNKEYVRECQIDSDMEVWLPDDYVNSVNERLKLYTELDHLENEEQLREFRNKLKDRFGPLPEVVEALFDTIRIRWAAKQLGFERIVLKNGNMKGYFIGKQDSPFYQSATFGNVMQYIQENQSFCNLKQTERYLILTIDNITSMAEARSQLQNIVKAVEAVASATEG*