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sw_8_scaffold_4297_2

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(789..3455)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FS38_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 935.0
  • Bit_score: 983
  • Evalue 1.00e-283
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 935.0
  • Bit_score: 983
  • Evalue 2.90e-284
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AGA76754.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echin similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 935.0
  • Bit_score: 983
  • Evalue 1.50e-283

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2667
TTGGACGTTCCCAAGGATGCTGCTGTGCTGGAGGTAAGCTACGTAGGGTATACGAATAGAGAAGTACAGTTGAGCGACGGCAGGAGCGGGTACCGGATTGAGATGGAGCCCGAGAGCGCACTGATGGATGAAGTAGCGGTGGTTGCGTACGGCGAGCAGAGAAGAGAGGACATAACAGGGTCCATATCTACGGCCGACGCAGAGGATTTCAACCAGGGAGTCAATGCTAGCCCTGGAGATTTAATACAAGGCGTGGTATCCGGCGTGAATGTGACGAGCGCAACGGGAGAGCCCGGTGCTGCACAGGATATAATTATCCGGGGCGTAGGTAGCTTGCGATCCGGGACCCAGCCACTTTTTGTAATCGATGGGGTTACGTTGAGCAACAACTCCACAGTCCCAACCAATCCGCTGAATTTCATCAACCCAGAAGACATCGAGAGTATCGAGGTGTTGAAAGATGCTTCGGCTACGGCTCTCTATGGTGCAAGAGCTTCTAATGGTGTAGTAGTAATAAAAACTAAAGGGGGAGAGATGGAGGACGACACTAGAATGTCTATCTCTACGTCTACTTCCATGTCCACTTTGGCCAATGAGATCGATGTATTCGGTGCAGATGAGTTTCGTGACAAGGTAGCCGAAATAGGAAATTTGCAGGACTTCGGAGCAAGCACTGACTGGCAGGATGAGCTGACTCGAACTGCCCTAACGAATGAAGTGAACTTTTCTTTGAGTGGTGCTTTGTCTGAAAAGCTTAACTACTACGCCTCACTTGGTGTAAAAGACCAGGAGGGAATTCTGGAGACAAGTAATCTTCAGAGGTACTCAGGCACAACGATTTCTCCTCTCACAGATGGTTCACCTACTCAGCTTCAGGAAAGGTTGAACCCTCTTCGGAGAAACGATATATTTAGTGATGAAACCACAAACAACCGTATCGTTGCCGACATCAATCCTTCGATAAAGATTACGAACGGGTTGACCTGGGACACGAAACTTGGAGTGGACTACTCAGAATCTAACAGAAACGTGCAAACCGATCCCCTTCCGCAGATATCTAATGAGAGTGTTCAAGAGGGAGAGCTAACAAATTCTAACCAGGAAAATCGAAACTACCTCGTAGAGAGTACTCTTGAATACCAACTTGACAGAGATCTCCACTCTGCTACATTTCTTTCGGGATATGCTTTCGAATATTTTCGTAACGAGGGTAGGTTTACGGACATGGAAGGGTTTCGAAGTAATGGGGTCGATCCCCGCTTTCAGGACAATATAGGTACAAATCAGAATCCCATCGATTCGGACGCTTTTGCAGAAGAGAACAAGCTTCAATCCTTCTTCGGAAGGGTAAATTACACTTATGATGATACATACCTTCTTACTGCTACAATCCGTGCGGATGGTTCCTCCAAATTTGGTGAAAACAGTAGATATGGATATTTTCCCTCTTTTGCCTTAGGATATAACATTGACGAGGAGGATTTCTTCAATGTCTCATTTGTAGACAACTTAAAAATACGGGCTAGCTGGGGACAAACCGGTACCCAAGCAATACCAAATAAAATTACGAAAAGAAGCATTACTGAAAGCAGACAAGGCAACAATACTTATCCTGTAAACCAGGACGCCACCAGCCGGGATGGGTATCCGTTTGGCCGCATTCGTACGCGGTTGGCAAACCCCGACATCCAGTGGGAAGTCTCCACACAGACGGACGTTGGTGTCGACTTTGAACTGTTCGGCTCTCGCCTGACGGGTTCGTTTGACTACTATAGAAAGGTCTCGAGCGATATTTTGCTGGAAAGAACTCCAGTGGACCCCGTTACGCCCACGTCCACTGTTTGGACCAATGTTCCTAACATGAAAATTAAGAACACAGGTTTCGAATTGAATCTTGAGCACAGAAACAGCCTTTCGACGGACTTTCAATACACCATTGGCGGGAATGTCTCCGTTAATAATAACGAGGTTCAGGATTCGCCATTTTCCATTTTGACCACGGGAGCTGCTCAAGGAGCGGGCCAGACCGATGCAACGATCAATGGTTATATCAATGGAGAACCGATCGGTGCATTTTTCATGCTGGAACACGACGGAATTGGCGACGACGGGCTTAACAAGTTCGTCGATAGAAACGGCGATGGAGAAATCCTGGAAGACGACCGCTTCGTTGCGGGTAGCGCACTTCCAGACATGCTGTTCGGATTCCAAGTTAATCTGAACTACAAAAGCATTGGACTGGACATGAACTTTAACGGAGCTTTAGGACACCAAATTTACAATCACACTGCCATGACGAGTTTCAACAGAGGAGACTTGGCAGGAAGCGACAATACCACGGATCTTGCCACACAATTTCCTGATGAGGACCCCGGTAACTCAAACACAGTTTCAACACGTTACCTTGAGGACGGTGACTATCTGAGGTTGAATAGTGCAACATTTTCCTACACCGTAAGCCCAAACCTGATCGGACTCGATGGAGAGACTAGAACCCTTGAGGTGACGTTAACAGGTCAAAATCTGTTTACCATTACGCCTTATAATGGCTTTGACCCTGAAGTGAACACAGGAACTGAAATCAACGACATACAGAGCTTTGGCATCGACCGATTTACCTACCCTCGCGCAAGAACATTCGATGTGGGTTTAAATCTCATGTTCTAA
PROTEIN sequence
Length: 889
LDVPKDAAVLEVSYVGYTNREVQLSDGRSGYRIEMEPESALMDEVAVVAYGEQRREDITGSISTADAEDFNQGVNASPGDLIQGVVSGVNVTSATGEPGAAQDIIIRGVGSLRSGTQPLFVIDGVTLSNNSTVPTNPLNFINPEDIESIEVLKDASATALYGARASNGVVVIKTKGGEMEDDTRMSISTSTSMSTLANEIDVFGADEFRDKVAEIGNLQDFGASTDWQDELTRTALTNEVNFSLSGALSEKLNYYASLGVKDQEGILETSNLQRYSGTTISPLTDGSPTQLQERLNPLRRNDIFSDETTNNRIVADINPSIKITNGLTWDTKLGVDYSESNRNVQTDPLPQISNESVQEGELTNSNQENRNYLVESTLEYQLDRDLHSATFLSGYAFEYFRNEGRFTDMEGFRSNGVDPRFQDNIGTNQNPIDSDAFAEENKLQSFFGRVNYTYDDTYLLTATIRADGSSKFGENSRYGYFPSFALGYNIDEEDFFNVSFVDNLKIRASWGQTGTQAIPNKITKRSITESRQGNNTYPVNQDATSRDGYPFGRIRTRLANPDIQWEVSTQTDVGVDFELFGSRLTGSFDYYRKVSSDILLERTPVDPVTPTSTVWTNVPNMKIKNTGFELNLEHRNSLSTDFQYTIGGNVSVNNNEVQDSPFSILTTGAAQGAGQTDATINGYINGEPIGAFFMLEHDGIGDDGLNKFVDRNGDGEILEDDRFVAGSALPDMLFGFQVNLNYKSIGLDMNFNGALGHQIYNHTAMTSFNRGDLAGSDNTTDLATQFPDEDPGNSNTVSTRYLEDGDYLRLNSATFSYTVSPNLIGLDGETRTLEVTLTGQNLFTITPYNGFDPEVNTGTEINDIQSFGIDRFTYPRARTFDVGLNLMF*