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sw_8_scaffold_8452_1

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(3..1694)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 564.0
  • Bit_score: 869
  • Evalue 2.50e-249
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 564.0
  • Bit_score: 856
  • Evalue 1.20e-245
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 564.0
  • Bit_score: 856
  • Evalue 3.40e-246

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1692
CGTGCTCAAATTACAGCTGAAGGTGATGGCGTAATCGAATTCGTTGATGCGGACGAAATTGTCGTCCGCTACGACAGAGATGAGAATGAGGAACTCGTGAGTTTTGACGAAAACAAAAAATCCTACAGGCTCACCAAATACAAGAAGACCAATCAAAGCACCTCAATTAACCTGAAGCCCAACGTTAATAAGGGTCAACGGGTCAAGAAAGGCGAGATATTATCGGAAGGCTTCGGTACCGATAATGGTGAGTTAGCGATTGGCCGCAACTTGATGGTATCCTTTATGCCGTGGAAAGGGTATAACTTCGAAGACGCCATTATCCTTTCAGACAGGGTTGTAACAGAAGACCTGTTTACTTCAGTACACGTACAGGAATTTGAATTGGATGTGCGTGACACAAAACTCGGTGAAGAAGAGTTAACAGCGGATATTCCCAATGTGAGTGAAGAAGCGACAAAGGATCTCGATGATAACGGTATCATTCGTCTTGGTGCCGAAATCACAGATGGGGATATCATCATCGGCAAGATCACACCTAAGGGTGAAAGTGATCCCACGCCCGAAGAAAAGCTCCTCCGTGCCATTTTTGGCGATAAAGCGGGCGATGTTAAGGATGCATCCTTAAAAGCACCTCCTTCAACAGATGGTGTGGTTATTGATAAACAGCTCTTTGAGCGCGCCAAGAAAGATAAACAAGCAAAAGCCAGGGAAAAGGTAGTCGTTGAAAAGCTCGACAAGGAGCATGAGAAGAACAACGAGGAATACAGGAAGAACCTTGTTGAAAAGCTTCAAAAATTGCTAAAAGGCAAGAAATCAGCTGGTGTTCAAACGGTTTACAAGGAAGAAGCAATTCCCAAGGGTGCCAAATTCACCCAGAAAGTGCTGAACGAACTGAACTTTGAAACGATTGATCCCACAGGTTGGACGAGTGATGATGAAACTAACACATTTGTCCGGAAATTATTGCACAACTATCGTTTGAAGTTGAATGATGAGCTGGGCCGCTACAAGCGCGAGAAATACAACGTGAGTATTGGCGATGAACTTCCTTCAGGGGTATTGAAGCTCGCTAAAGTTTATTTGGCGAAAAGACGTAAGATGAAAGTAGGCGACAAGCTTGCCGGGCGCCACGGCAATAAGGGTATTGTGTCAAAAATTGTGCGCCAGGAAGATATGCCATTCCTTGAAGATGGAACGCCTGTTGACATTGTGCTTAATCCCCTGGGTGTGCCTTCGCGCATGAACATCGGTCAGATTTACGAATCTGTGCTCGGCTGGGCAGGCCTTAAGTTGAACAAGAAATACGCTACACCTATTTTCGATGGGGCTTCTGTCGATGAGATTGATGAGCAAATTCAGGAGGCAGGACTCCCCTCACTTGGTAAAACGTATTTGTTCGATGGCGAAACGGGTGAGCGATTCCATCAGGAAGCAACAGTTGGCGTTATTTACATGCTAAAGCTGTCGCATATGATAGAGGATAAAATGCACGCCCGTTCTATAGGCCCCTATTCATTAATCACTCAGCAACCTCTCGGTGGTAAGGCCCAATTTGGTGGTCAGCGTTTTGGCGAAATGGAGGTTTGGGCACTTGAAGCCTTTGGCGCGTCTAATGTGCTCCAGGAGTTGCTTACTGTCAAATCTGACGATATACAAGGGCGTGCTAAAACATACGAAACCATTGTCAAG
PROTEIN sequence
Length: 564
RAQITAEGDGVIEFVDADEIVVRYDRDENEELVSFDENKKSYRLTKYKKTNQSTSINLKPNVNKGQRVKKGEILSEGFGTDNGELAIGRNLMVSFMPWKGYNFEDAIILSDRVVTEDLFTSVHVQEFELDVRDTKLGEEELTADIPNVSEEATKDLDDNGIIRLGAEITDGDIIIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKAPPSTDGVVIDKQLFERAKKDKQAKAREKVVVEKLDKEHEKNNEEYRKNLVEKLQKLLKGKKSAGVQTVYKEEAIPKGAKFTQKVLNELNFETIDPTGWTSDDETNTFVRKLLHNYRLKLNDELGRYKREKYNVSIGDELPSGVLKLAKVYLAKRRKMKVGDKLAGRHGNKGIVSKIVRQEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYESVLGWAGLKLNKKYATPIFDGASVDEIDEQIQEAGLPSLGKTYLFDGETGERFHQEATVGVIYMLKLSHMIEDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAFGASNVLQELLTVKSDDIQGRAKTYETIVK