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sw_8_scaffold_8747_1

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(2..1456)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 475.0
  • Bit_score: 786
  • Evalue 2.40e-224
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 475.0
  • Bit_score: 786
  • Evalue 1.70e-224
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 475.0
  • Bit_score: 786
  • Evalue 4.90e-225

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAGCAACACTACCACGGATCTTAAACTACAAAGAGTAAGTTTTGGGAAAATTGCCAAAGGTGTTGAATATCCCGATTTACTCAGTATACAAATCCAATCATTTCAAAACTTCTTCCAATTAGAGACTTCTCCTGAAGACAGGAGTGACGAGGGTTTATATAAAGTATTCACAGAAAATTTCCCCATCACGGATGCCCGAAATATCTTCGTGTTGGAATTTTTGGATTATTTTGTCGATCCTCCTCGCTATTCTATCGAGGAATGTGTAGAAAGAGGTCTCACTTATAGTGTGCCTCTTAAAGCTAAGCTACGCCTATCCTGTAATGATGAAGAACACGTGGATTTTGAAACAATTGAGCAGGATGTATTTCTCGGGAATATTCCGTACATGACGCCTAAGGGAACTTTTGTGATCAACGGTGCAGAGCGTCTTGTTGTTACGCAATTGCATCGCTCACCTGGCGTCTTTTTCGGCCAAAGCGTGCACCCAAATGGTACCAAGATTTATTCGGCCCGGGTAATACCGTTCAAAGGGGCATGGATGGAGTTTGCTACTGACATCAACAATGTGATGTACGCATATATTGATCGGAAGAAAAAGTTTCCCGTGACAACCCTCCTGCGTGCCATCGGTTATGATTCCGACAGGGAAATCTTGTCTCTCTTTGAATTAGCCGATGAAGTGAAGGTTAATAAAAAGAACCGCAGCAAGCTCAAAGACAGAAAATTAGCTGCCCGCGTACTAAACAGCTGGAATGAAGATTTCGTGGATGAAGATACGGGTGAGGTTGTGACTATTGAGCGGAATGAAGTAATTCTGGAAAGGGATACTGTACTGGACGAGGAATCGATCCAAAAAATAGAAGAAACAGGCGTTGAGACTGTTATCCTTCAGAAAGAAGATCTATCTGAGGATTATTCGATTATCTACAATACGCTCCAGAAAGATAGTTCCAATTCCGAACTGGAAGCCGTACAACATATTTACCGTCAACTCCGTGGATCAGAAGCACCTGATGAAGAAACAGCACGAGGAATAATCGATAAGCTGTTCCTTTCTGACAAACGTTATGATCTTGGTGACGTAGGCCGTTACAAGATCAACAGGAAACTGGATGTCAGTGTGGATTTCGAAACACGCACACTGACAAAGGATGACATCATATCCATTGTCAAATATCTTGTAAAGCTCAGCAATTCCAAGGCCGAGATCGATGACATTGACCATCTCAGCAACAGGCGTGTAAAAACGGTAGGTGAACAGCTCTATCAACAGTTCGGTGTTGGTTTGTCCCGTATGGCTCGAACCATTCGTGAAAGAATGAATGTGAGGGATAATGAGGTATTTACTCCTGTCGATCTTATCAACGCCCGCACGCTTTCGTCTGTCATTAACTCGTTCTTCGGCACGAGTCAACTGTCTCAATTTCTCGACCAAACCAACCCACTTTCC
PROTEIN sequence
Length: 485
MSNTTTDLKLQRVSFGKIAKGVEYPDLLSIQIQSFQNFFQLETSPEDRSDEGLYKVFTENFPITDARNIFVLEFLDYFVDPPRYSIEECVERGLTYSVPLKAKLRLSCNDEEHVDFETIEQDVFLGNIPYMTPKGTFVINGAERLVVTQLHRSPGVFFGQSVHPNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTTLLRAIGYDSDREILSLFELADEVKVNKKNRSKLKDRKLAARVLNSWNEDFVDEDTGEVVTIERNEVILERDTVLDEESIQKIEETGVETVILQKEDLSEDYSIIYNTLQKDSSNSELEAVQHIYRQLRGSEAPDEETARGIIDKLFLSDKRYDLGDVGRYKINRKLDVSVDFETRTLTKDDIISIVKYLVKLSNSKAEIDDIDHLSNRRVKTVGEQLYQQFGVGLSRMARTIRERMNVRDNEVFTPVDLINARTLSSVINSFFGTSQLSQFLDQTNPLS