ggKbase home page
Advanced Search
Search Help

SW_8_Bacteroidetes_43_5

In projects: SW_8

Consensus taxonomy: Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %
Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Displaying items 151-200 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_18232
Species: Hymenobacter swuensis (50%)
2 1004 bp 41.93 4.28 81.27
sw_8_scaffold_37990
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1080 bp 41.02 3.06 84.72
sw_8_scaffold_5791
Species: Marivirga tractuosa (50%)
2 2723 bp 43.96 5.25 27.21
sw_8_scaffold_14088
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1201 bp 42.71 4.91 98.42
sw_8_scaffold_28235
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1175 bp 41.45 4.77 49.70
sw_8_scaffold_12937
Species: Owenweeksia hongkongensis (50%)
2 1272 bp 46.15 4.72 96.46
sw_8_scaffold_14319
Species: Bacteroides vulgatus (50%)
2 1187 bp 42.54 4.80 88.21
sw_8_scaffold_3622
Species: Joostella marina (50%)
2 2931 bp 42.75 5.87 99.18
sw_8_scaffold_13399
Species: Flavobacterium subsaxonicum (50%)
2 1245 bp 47.15 4.02 90.60
sw_8_scaffold_15010
Species: Muricauda lutaonensis (50%)
2 1150 bp 43.13 5.91 78.78
sw_8_scaffold_10634
Species: Marivirga tractuosa (100%)
2 1454 bp 40.85 6.88 52.20
sw_8_scaffold_15242
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1138 bp 41.48 4.66 80.40
sw_8_scaffold_9712
Species: Sphingobacterium sp. 21 (50%)
2 1542 bp 44.16 5.64 79.38
sw_8_scaffold_5566
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 2217 bp 45.42 4.42 98.65
sw_8_scaffold_13170
Species: Bacteroides sp. 3_1_33FAA (50%)
2 1258 bp 45.31 5.56 44.83
sw_8_scaffold_14553
Species: Bergeyella zoohelcum (50%)
2 1173 bp 44.67 5.46 94.63
sw_8_scaffold_16397
Species: Pedobacter glucosidilyticus (50%)
2 1083 bp 43.12 5.91 81.44
sw_8_scaffold_30505
Species: Salinibacter ruber (50%)
2 1259 bp 44.64 5.08 58.38
sw_8_scaffold_9255
Species: Pontibacter korlensis (50%)
2 1597 bp 47.28 4.51 76.08
sw_8_scaffold_13404
Species: Phaeodactylibacter xiamenensis (50%)
2 2059 bp 44.24 5.15 93.54
sw_8_scaffold_13869
Species: Cyclobacterium marinum (50%)
2 1216 bp 46.13 4.28 37.75
sw_8_scaffold_39958
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1051 bp 39.96 5.90 59.09
sw_8_scaffold_17787
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1907 bp 40.74 4.88 79.60
sw_8_scaffold_7879
Species: Phaeodactylibacter xiamenensis (50%)
2 2255 bp 44.17 5.14 78.09
sw_8_scaffold_26108
Species: Solitalea canadensis (50%)
2 1187 bp 43.22 4.80 51.56
sw_8_scaffold_12029
Species: GWF2_Bacteroidetes_38_335_curated (100%)
2 1339 bp 40.48 3.58 100.15
sw_8_scaffold_10187
Species: R_Bacteroidetes_44_7 (50%)
2 1495 bp 44.28 4.41 94.72
sw_8_scaffold_22233
Species: Draconibacterium orientale (50%)
2 1673 bp 46.92 5.14 91.99
sw_8_scaffold_8345
Species: Lacinutrix sp. 5H-3-7-4 (50%)
2 1710 bp 39.77 3.51 82.63
sw_8_scaffold_10421
Species: Haliscomenobacter hydrossis (50%)
2 1474 bp 42.67 4.75 46.61
sw_8_scaffold_33339
Species: Microscilla marina (50%)
2 1191 bp 46.77 4.79 64.99
sw_8_scaffold_13191
Species: Pedobacter glucosidilyticus (50%)
2 1257 bp 45.82 6.28 89.50
sw_8_scaffold_12962
Species: R_Fluviicola_43_260 (50%)
2 1270 bp 42.13 6.30 91.65
sw_8_scaffold_9505
Species: Odoribacter laneus CAG:561 (50%)
2 1566 bp 39.66 5.56 51.72
sw_8_scaffold_18840
Species: Robiginitalea biformata (50%)
2 1588 bp 47.98 5.73 102.77
sw_8_scaffold_18263
Species: Flavihumibacter sp. ZG627 (50%)
2 1002 bp 47.90 5.59 96.71
sw_8_scaffold_12504
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1302 bp 43.47 5.38 90.32
sw_8_scaffold_15270
Species: Microscilla marina (50%)
2 1137 bp 48.46 4.93 62.53
sw_8_scaffold_20587
Species: Cesiribacter andamanensis (50%)
2 1477 bp 41.77 7.45 55.45
sw_8_scaffold_27263
Species: Flexibacter litoralis (50%)
2 1387 bp 43.69 3.82 71.59
sw_8_scaffold_18269
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1002 bp 45.11 5.39 93.41
sw_8_scaffold_21473
Species: RBG_13_Bacteroidetes_43_22_curated (50%)
2 1439 bp 41.49 4.31 101.11
sw_8_scaffold_9053
Species: Phaeodactylibacter xiamenensis (50%)
2 1623 bp 44.42 5.42 65.62
sw_8_scaffold_8825
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1649 bp 40.27 4.00 94.24
sw_8_scaffold_9978
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 1516 bp 40.83 4.75 84.89
sw_8_scaffold_13666
Species: Pontibacter korlensis (50%)
2 1227 bp 40.91 4.40 96.82
sw_8_scaffold_21499
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 1733 bp 44.37 5.25 91.58
sw_8_scaffold_4225
Species: Sporocytophaga myxococcoides (50%)
2 2651 bp 47.34 5.32 78.54
sw_8_scaffold_10901
Species: Leadbetterella byssophila (50%)
2 1431 bp 43.54 4.05 84.49
sw_8_scaffold_11131
Species: GWB2_Bacteroidetes_41_8_curated (50%)
2 1411 bp 44.79 4.11 95.89
Displaying items 151-200 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.