ggKbase | organisms

Consensus taxonomy: Bacteroidetes → Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %

Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1

Displaying items 201-250 of 620 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_8_scaffold_8020 Species: GWE2_Bacteroidetes_32_14_curated (50%)	2	1757 bp	43.65	5.46	92.03
sw_8_scaffold_7522 Phylum: Bacteroidetes (66.67%)	3	2410 bp	45.35	6.02	91.99
sw_8_scaffold_22233 Species: Draconibacterium orientale (50%)	2	1673 bp	46.92	5.14	91.99
sw_8_scaffold_9190 Phylum: Bacteroidetes (100%)	3	1604 bp	44.58	6.98	91.83
sw_8_scaffold_9854 Species: Hymenobacter sp. DG25B (50%)	2	1528 bp	42.15	3.73	91.69
sw_8_scaffold_9173 Phylum: Bacteroidetes (66.67%)	3	1607 bp	45.86	5.23	91.66
sw_8_scaffold_12962 Species: R_Fluviicola_43_260 (50%)	2	1270 bp	42.13	6.30	91.65
sw_8_scaffold_9914 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (100%)	1	1523 bp	47.60	6.76	91.60
sw_8_scaffold_21499 Species: GWF2_Bacteroidetes_38_335_curated (50%)	2	1733 bp	44.37	5.25	91.58
sw_8_scaffold_17073 Species: Fulvivirga imtechensis (100%)	1	1750 bp	46.11	5.77	91.54
sw_8_scaffold_3430 Class: Bacteroidia (50%)	4	3029 bp	43.28	4.46	91.52
sw_8_scaffold_7662 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (66.67%)	3	1809 bp	41.63	5.47	91.38
sw_8_scaffold_22163 Order: Sphingobacteriales (50%)	4	1368 bp	42.62	4.17	91.23
sw_8_scaffold_9575 Species: Saprospira grandis (50%)	2	1559 bp	43.87	4.04	91.21
sw_8_scaffold_15157 Species: Cyclobacterium qasimii (50%)	2	1143 bp	44.53	4.55	91.08
sw_8_scaffold_3267 Phylum: Bacteroidetes (100%)	4	3114 bp	42.32	6.55	91.04
sw_8_scaffold_5865 Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	2142 bp	41.88	5.09	91.04
sw_8_scaffold_9706 Species: Sporocytophaga myxococcoides (50%)	2	1543 bp	42.77	3.18	90.99
sw_8_scaffold_7207 Species: BJP_08E140C01_Bacteriodales_41_10 (100%)	1	1883 bp	44.18	5.31	90.97
sw_8_scaffold_15622 Species: Chitinophaga pinensis (100%)	2	1875 bp	44.16	4.59	90.88
sw_8_scaffold_13438 Species: Owenweeksia hongkongensis (50%)	2	1242 bp	43.56	4.51	90.82
sw_8_scaffold_11540 Species: Ornithobacterium rhinotracheale (50%)	2	1378 bp	48.55	4.35	90.78
sw_8_scaffold_5011 Phylum: Bacteroidetes (50%)	4	2902 bp	40.97	5.62	90.77
sw_8_scaffold_13449 Species: Chitinophaga pinensis (50%)	2	1241 bp	42.22	5.00	90.65
sw_8_scaffold_13399 Species: Flavobacterium subsaxonicum (50%)	2	1245 bp	47.15	4.02	90.60
sw_8_scaffold_28771 Species: Fluviicola taffensis (50%)	2	2056 bp	46.50	4.62	90.47
sw_8_scaffold_9155 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)	2	1609 bp	40.52	4.85	90.43
sw_8_scaffold_12504 Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	1302 bp	43.47	5.38	90.32
sw_8_scaffold_14308 Species: Phaeodactylibacter xiamenensis (50%)	2	1187 bp	46.08	5.22	90.23
sw_8_scaffold_7239 Species: Niastella koreensis (50%)	2	1876 bp	41.36	5.76	90.19
sw_8_scaffold_6472 Phylum: Bacteroidetes (100%)	3	2012 bp	44.78	4.32	90.06
sw_8_scaffold_18220 Order: Sphingobacteriales (100%)	3	1549 bp	44.48	4.00	90.06
sw_8_scaffold_5381 Species: Schleiferia thermophila (66.67%)	3	2264 bp	43.46	2.96	89.97
sw_8_scaffold_8191 Species: Marivirga tractuosa (50%)	2	1731 bp	45.75	4.85	89.77
sw_8_scaffold_11556 Phylum: Bacteroidetes (100%)	3	2386 bp	44.51	4.78	89.77
sw_8_scaffold_14290 Species: GWD2_Bacteroidetes_33_33_curated (50%)	2	1188 bp	40.07	3.45	89.65
sw_8_scaffold_8671 Phylum: Bacteroidetes (50%)	4	1667 bp	46.61	6.06	89.62
sw_8_scaffold_30435 Phylum: Bacteroidetes (66.67%)	3	1209 bp	42.02	4.96	89.58
sw_8_scaffold_13191 Species: Pedobacter glucosidilyticus (50%)	2	1257 bp	45.82	6.28	89.50
sw_8_scaffold_6853 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)	2	1941 bp	42.50	5.26	89.49
sw_8_scaffold_4145 Species: Microscilla marina (66.67%)	3	2679 bp	44.16	5.34	89.36
sw_8_scaffold_16321 Species: Saprospira grandis (50%)	2	1549 bp	43.64	4.20	89.28
sw_8_scaffold_17286 Species: RBG_13_Bacteroidetes_46_8_curated (50%)	2	1042 bp	43.86	6.43	89.25
sw_8_scaffold_5910 Phylum: Bacteroidetes (100%)	4	3859 bp	46.39	5.29	89.09
sw_8_scaffold_20672 Species: Chitinophaga pinensis (50%)	2	1483 bp	42.82	4.92	89.01
sw_8_scaffold_4490 Phylum: Bacteroidetes (100%)	3	2552 bp	42.67	5.68	88.99
sw_8_scaffold_6762 Phylum: Bacteroidetes (80%)	5	3388 bp	41.62	7.08	88.90
sw_8_scaffold_8620 Phylum: Bacteroidetes (66.67%)	3	1674 bp	44.21	5.20	88.89
sw_8_scaffold_22360 Phylum: Bacteroidetes (100%)	3	1665 bp	45.65	5.11	88.83
sw_8_scaffold_18068 Species: Pedobacter heparinus (50%)	2	1010 bp	45.74	4.85	88.81

Displaying items 201-250 of 620 in total

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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