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SW_8_Bacteroidetes_43_5

In projects: SW_8

Consensus taxonomy: Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %
Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Displaying items 251-300 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_13606
Species: Aequorivita sublithincola (50%)
2 1807 bp 41.67 4.76 74.38
sw_8_scaffold_34486
Species: Chitinophaga pinensis (50%)
2 1080 bp 42.78 4.35 86.67
sw_8_scaffold_3785
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 3626 bp 43.02 4.80 67.51
sw_8_scaffold_18687
Species: Pedobacter glucosidilyticus (50%)
2 1666 bp 42.14 4.80 72.03
sw_8_scaffold_6695
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1968 bp 42.94 4.57 93.90
sw_8_scaffold_8309
Species: GWA2_Bacteroidetes_31_9b_curated (50%)
2 1715 bp 46.01 5.89 98.48
sw_8_scaffold_12919
Species: GWF2_Bacteroidetes_33_38_curated (50%)
2 1922 bp 44.28 5.83 82.73
sw_8_scaffold_5776
Species: Flavihumibacter sp. ZG627 (50%)
2 2168 bp 42.11 5.72 94.79
sw_8_scaffold_10847
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1435 bp 42.86 6.76 92.40
sw_8_scaffold_11769
Species: RLO_Flavobacteria_35_11 (50%)
2 1359 bp 42.46 5.45 83.22
sw_8_scaffold_24020
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 2158 bp 43.37 4.91 79.66
sw_8_scaffold_27054
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1470 bp 43.20 4.56 92.45
sw_8_scaffold_15917
Species: GWF2_Bacteroidetes_33_38_curated (50%)
2 1105 bp 41.45 5.61 83.35
sw_8_scaffold_13844
Species: Fibrisoma limi (50%)
2 1217 bp 44.29 5.34 58.18
sw_8_scaffold_11540
Species: Ornithobacterium rhinotracheale (50%)
2 1378 bp 48.55 4.35 90.78
sw_8_scaffold_13384
Species: Owenweeksia hongkongensis (50%)
2 1713 bp 46.12 5.95 75.13
sw_8_scaffold_11541
Species: Cyclobacterium qasimii (50%)
2 2595 bp 41.31 5.90 99.88
sw_8_scaffold_18224
Species: Flavihumibacter petaseus (50%)
2 1004 bp 44.72 4.38 77.39
sw_8_scaffold_18703
Species: Sphingobacterium sp. ACCC 05744 (50%)
2 1713 bp 40.28 4.96 74.26
sw_8_scaffold_14308
Species: Phaeodactylibacter xiamenensis (50%)
2 1187 bp 46.08 5.22 90.23
sw_8_scaffold_6937
Species: GWE2_Bacteroidetes_32_14_curated (50%)
2 1927 bp 43.54 4.67 67.10
sw_8_scaffold_7629
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1815 bp 44.68 4.57 92.56
sw_8_scaffold_13160
Species: Phaeodactylibacter xiamenensis (50%)
2 2449 bp 41.40 5.35 94.32
sw_8_scaffold_9012
Species: Chitinophaga pinensis (50%)
2 2176 bp 47.52 5.70 86.86
sw_8_scaffold_9706
Species: Sporocytophaga myxococcoides (50%)
2 1543 bp 42.77 3.18 90.99
sw_8_scaffold_14085
Species: Pontibacter sp. BAB1700 (50%)
2 1201 bp 40.80 5.66 77.19
sw_8_scaffold_18232
Species: Hymenobacter swuensis (50%)
2 1004 bp 41.93 4.28 81.27
sw_8_scaffold_37990
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1080 bp 41.02 3.06 84.72
sw_8_scaffold_5791
Species: Marivirga tractuosa (50%)
2 2723 bp 43.96 5.25 27.21
sw_8_scaffold_14088
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1201 bp 42.71 4.91 98.42
sw_8_scaffold_28235
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1175 bp 41.45 4.77 49.70
sw_8_scaffold_12937
Species: Owenweeksia hongkongensis (50%)
2 1272 bp 46.15 4.72 96.46
sw_8_scaffold_14319
Species: Bacteroides vulgatus (50%)
2 1187 bp 42.54 4.80 88.21
sw_8_scaffold_3622
Species: Joostella marina (50%)
2 2931 bp 42.75 5.87 99.18
sw_8_scaffold_13399
Species: Flavobacterium subsaxonicum (50%)
2 1245 bp 47.15 4.02 90.60
sw_8_scaffold_15010
Species: Muricauda lutaonensis (50%)
2 1150 bp 43.13 5.91 78.78
sw_8_scaffold_10634
Species: Marivirga tractuosa (100%)
2 1454 bp 40.85 6.88 52.20
sw_8_scaffold_15242
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1138 bp 41.48 4.66 80.40
sw_8_scaffold_9712
Species: Sphingobacterium sp. 21 (50%)
2 1542 bp 44.16 5.64 79.38
sw_8_scaffold_5566
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 2217 bp 45.42 4.42 98.65
sw_8_scaffold_13170
Species: Bacteroides sp. 3_1_33FAA (50%)
2 1258 bp 45.31 5.56 44.83
sw_8_scaffold_14553
Species: Bergeyella zoohelcum (50%)
2 1173 bp 44.67 5.46 94.63
sw_8_scaffold_16397
Species: Pedobacter glucosidilyticus (50%)
2 1083 bp 43.12 5.91 81.44
sw_8_scaffold_30505
Species: Salinibacter ruber (50%)
2 1259 bp 44.64 5.08 58.38
sw_8_scaffold_9255
Species: Pontibacter korlensis (50%)
2 1597 bp 47.28 4.51 76.08
sw_8_scaffold_13404
Species: Phaeodactylibacter xiamenensis (50%)
2 2059 bp 44.24 5.15 93.54
sw_8_scaffold_13869
Species: Cyclobacterium marinum (50%)
2 1216 bp 46.13 4.28 37.75
sw_8_scaffold_39958
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1051 bp 39.96 5.90 59.09
sw_8_scaffold_17787
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1907 bp 40.74 4.88 79.60
sw_8_scaffold_7879
Species: Phaeodactylibacter xiamenensis (50%)
2 2255 bp 44.17 5.14 78.09
Displaying items 251-300 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.