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SW_8_Bacteroidetes_43_5

In projects: SW_8

Consensus taxonomy: Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %
Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Displaying items 251-300 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_38611
Species: Chitinophaga pinensis (50%)
2 1021 bp 43.39 4.70 79.04
sw_8_scaffold_24383
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1313 bp 41.51 4.11 63.29
sw_8_scaffold_29710
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1255 bp 47.81 5.66 92.51
sw_8_scaffold_12099
Species: Runella slithyformis (50%)
2 1334 bp 46.10 5.70 85.01
sw_8_scaffold_12790
Species: Pontibacter sp. BAB1700 (50%)
2 1282 bp 40.33 5.15 98.52
sw_8_scaffold_14865
Species: GWE2_Bacteroidetes_29_8_curated (50%)
2 2511 bp 41.34 5.30 69.18
sw_8_scaffold_11640
Species: Fulvivirga imtechensis (50%)
2 1368 bp 47.44 6.14 85.31
sw_8_scaffold_13253
Species: Runella slithyformis (50%)
2 1253 bp 41.90 6.38 43.81
sw_8_scaffold_14175
Species: Pedobacter sp. NL19 (50%)
2 1196 bp 39.46 2.84 78.26
sw_8_scaffold_9336
Species: RBG_13_Bacteroidetes_42_15_curated (50%)
2 2677 bp 39.75 5.42 83.49
sw_8_scaffold_13485
Species: Pedobacter glucosidilyticus (50%)
2 1769 bp 42.28 3.34 80.05
sw_8_scaffold_7032
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1911 bp 42.86 5.23 95.45
sw_8_scaffold_11411
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1389 bp 47.44 5.69 94.38
sw_8_scaffold_7495
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 3307 bp 43.97 6.44 98.25
sw_8_scaffold_8878
Species: unidentified eubacterium SCB49 (50%)
2 1641 bp 41.68 5.73 22.85
sw_8_scaffold_9107
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1616 bp 41.21 4.27 80.75
sw_8_scaffold_16251
Species: GWF2_Bacteroidetes_43_11_curated (50%)
2 1090 bp 46.79 5.05 83.12
sw_8_scaffold_11415
Species: Dyadobacter fermentans (50%)
2 1389 bp 42.48 4.10 92.87
sw_8_scaffold_17868
Species: Pedobacter glucosidilyticus (50%)
2 1018 bp 44.99 4.22 100.49
sw_8_scaffold_19089
Species: RBG_13_Bacteroidetes_46_8_curated (50%)
2 1656 bp 45.29 4.35 31.88
sw_8_scaffold_16486
Species: Parabacteroides distasonis (50%)
2 1078 bp 48.33 5.94 86.55
sw_8_scaffold_16947
Species: Bacteroides sp. CAG:462 (50%)
2 1771 bp 43.65 5.08 85.71
sw_8_scaffold_8190
Species: Saprospira grandis (50%)
2 2669 bp 40.09 5.17 63.96
sw_8_scaffold_8191
Species: Marivirga tractuosa (50%)
2 1731 bp 45.75 4.85 89.77
sw_8_scaffold_13030
Species: Chitinophaga pinensis (50%)
2 2215 bp 44.88 5.24 88.04
sw_8_scaffold_9575
Species: Saprospira grandis (50%)
2 1559 bp 43.87 4.04 91.21
sw_8_scaffold_15799
Species: Fibrisoma limi (50%)
2 2179 bp 44.19 3.81 49.98
sw_8_scaffold_8887
Species: Marivirga tractuosa (50%)
2 1640 bp 44.02 5.43 88.35
sw_8_scaffold_11194
Species: Chryseobacterium indologenes (50%)
2 1406 bp 43.81 4.69 82.36
sw_8_scaffold_5898
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 2134 bp 40.02 6.47 97.84
sw_8_scaffold_8200
Species: GWE2_Bacteroidetes_40_63_curated (50%)
2 1730 bp 44.45 4.80 63.12
sw_8_scaffold_24504
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1296 bp 47.99 5.25 66.90
sw_8_scaffold_8896
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1639 bp 43.87 6.65 51.25
sw_8_scaffold_13967
Species: Phaeodactylibacter xiamenensis (50%)
2 1209 bp 41.36 5.96 86.85
sw_8_scaffold_18113
Species: Geofilum rubicundum (50%)
2 1009 bp 45.29 4.36 95.74
sw_8_scaffold_15119
Species: Pontibacter korlensis (50%)
2 1533 bp 40.38 5.48 81.60
sw_8_scaffold_5211
Species: GWA2_Bacteroidetes_31_9b_curated (50%)
2 2315 bp 45.36 5.01 97.58
sw_8_scaffold_10744
Species: GWF2_Bacteroidetes_33_38_curated (50%)
2 1446 bp 45.71 5.46 99.17
sw_8_scaffold_17427
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1037 bp 44.07 5.21 78.98
sw_8_scaffold_10516
Species: Chitinophaga pinensis (50%)
2 1464 bp 44.81 4.58 81.56
sw_8_scaffold_14664
Species: Zunongwangia profunda (50%)
2 1168 bp 41.10 5.31 70.12
sw_8_scaffold_16507
Species: Microscilla marina (50%)
2 1780 bp 39.72 4.55 94.55
sw_8_scaffold_20009
Species: Haliscomenobacter hydrossis (50%)
2 1407 bp 45.56 5.40 94.46
sw_8_scaffold_28771
Species: Fluviicola taffensis (50%)
2 2056 bp 46.50 4.62 90.47
sw_8_scaffold_16740
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 1066 bp 40.90 4.97 95.97
sw_8_scaffold_18124
Species: Pedobacter sp. V48 (50%)
2 1008 bp 41.57 4.37 87.80
sw_8_scaffold_5682
Species: Draconibacterium orientale (50%)
2 2188 bp 45.25 5.80 92.69
sw_8_scaffold_16743
Species: Solitalea canadensis (50%)
2 1066 bp 43.62 4.78 95.97
sw_8_scaffold_10293
Species: CG_Bacteroid_02 (50%)
2 1486 bp 45.90 5.18 57.74
sw_8_scaffold_17899
Species: GWF2_Bacteroidetes_43_63_curated (50%)
2 1017 bp 40.12 4.62 77.58
Displaying items 251-300 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.