ggKbase | organisms

Consensus taxonomy: Bacteroidetes → Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %

Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1

Displaying items 351-400 of 620 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_8_scaffold_26331 Species: Sphingobacterium sp. PM2-P1-29 (50%)	2	1509 bp	42.68	4.51	67.99
sw_8_scaffold_10067 Species: CG_Bacteroid_01 (100%)	1	1507 bp	48.18	4.84	98.94
sw_8_scaffold_10187 Species: R_Bacteroidetes_44_7 (50%)	2	1495 bp	44.28	4.41	94.72
sw_8_scaffold_10192 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (100%)	1	1495 bp	39.53	5.28	92.11
sw_8_scaffold_10222 Species: Salinibacter ruber (66.67%)	3	1493 bp	42.46	5.16	69.32
sw_8_scaffold_10232 Species: GWE2_Bacteroidetes_42_39_curated (50%)	2	1492 bp	41.69	3.69	87.27
sw_8_scaffold_10241 Species: Flavihumibacter petaseus (50%)	2	1491 bp	42.59	4.29	83.10
sw_8_scaffold_21635 Species: Chitinophaga pinensis (100%)	1	1489 bp	46.61	5.78	86.64
sw_8_scaffold_20773 Phylum: Bacteroidetes (66.67%)	3	1488 bp	42.61	4.77	61.49
sw_8_scaffold_10293 Species: CG_Bacteroid_02 (50%)	2	1486 bp	45.90	5.18	57.74
sw_8_scaffold_19326 Species: Pedobacter sp. BAL39 (100%)	1	1486 bp	42.26	5.85	28.47
sw_8_scaffold_10311 Phylum: Bacteroidetes (100%)	3	1485 bp	41.14	5.66	95.96
sw_8_scaffold_10319 Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1484 bp	42.72	4.51	102.90
sw_8_scaffold_19413 Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1484 bp	46.50	7.01	97.24
sw_8_scaffold_20672 Species: Chitinophaga pinensis (50%)	2	1483 bp	42.82	4.92	89.01
sw_8_scaffold_20587 Species: Cesiribacter andamanensis (50%)	2	1477 bp	41.77	7.45	55.45
sw_8_scaffold_10421 Species: Haliscomenobacter hydrossis (50%)	2	1474 bp	42.67	4.75	46.61
sw_8_scaffold_25752 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)	2	1471 bp	41.94	4.08	66.28
sw_8_scaffold_27054 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)	2	1470 bp	43.20	4.56	92.45
sw_8_scaffold_10454 Species: Saprospira grandis (50%)	2	1470 bp	45.44	5.37	80.82
sw_8_scaffold_10456 Species: Saprospira grandis (50%)	2	1470 bp	41.16	4.97	78.37
sw_8_scaffold_10508 Phylum: Bacteroidetes (66.67%)	3	1465 bp	41.50	5.32	83.34
sw_8_scaffold_10516 Species: Chitinophaga pinensis (50%)	2	1464 bp	44.81	4.58	81.56
sw_8_scaffold_10565 Species: Flammeovirgaceae bacterium 311 (100%)	1	1460 bp	47.88	4.73	99.86
sw_8_scaffold_10586 Species: Flavihumibacter sp. ZG627 (100%)	1	1458 bp	44.38	4.46	82.92
sw_8_scaffold_10624 Phylum: Bacteroidetes (66.67%)	3	1455 bp	43.30	4.81	73.20
sw_8_scaffold_10634 Species: Marivirga tractuosa (100%)	2	1454 bp	40.85	6.88	52.20
sw_8_scaffold_10680 Species: Pedobacter glucosidilyticus (50%)	2	1451 bp	48.04	4.55	83.32
sw_8_scaffold_10683 Species: Pseudopedobacter saltans (100%)	1	1451 bp	42.59	5.10	99.86
sw_8_scaffold_10692 Species: Flavobacterium reichenbachii (100%)	1	1450 bp	43.59	5.31	53.38
sw_8_scaffold_10727 Species: Phaeodactylibacter xiamenensis (100%)	1	1447 bp	43.88	4.28	99.93
sw_8_scaffold_10744 Species: GWF2_Bacteroidetes_33_38_curated (50%)	2	1446 bp	45.71	5.46	99.17
sw_8_scaffold_20384 Species: Niastella koreensis (100%)	1	1444 bp	43.35	3.95	99.93
sw_8_scaffold_21473 Species: RBG_13_Bacteroidetes_43_22_curated (50%)	2	1439 bp	41.49	4.31	101.11
sw_8_scaffold_10847 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)	2	1435 bp	42.86	6.76	92.40
sw_8_scaffold_10901 Species: Leadbetterella byssophila (50%)	2	1431 bp	43.54	4.05	84.49
sw_8_scaffold_10902 Species: Haliscomenobacter hydrossis (50%)	2	1431 bp	43.61	6.01	74.21
sw_8_scaffold_11000 Species: GWF2_Bacteroidetes_33_38_curated (50%)	2	1423 bp	44.98	3.72	88.76
sw_8_scaffold_11062 Species: Owenweeksia hongkongensis (100%)	1	1417 bp	45.66	4.80	99.93
sw_8_scaffold_11131 Species: GWB2_Bacteroidetes_41_8_curated (50%)	2	1411 bp	44.79	4.11	95.89
sw_8_scaffold_21851 Phylum: Bacteroidetes (66.67%)	3	1410 bp	44.61	4.82	95.96
sw_8_scaffold_11159 Species: CG_Bacteroid_01 (50%)	2	1409 bp	44.85	5.96	64.73
sw_8_scaffold_20009 Species: Haliscomenobacter hydrossis (50%)	2	1407 bp	45.56	5.40	94.46
sw_8_scaffold_11194 Species: Chryseobacterium indologenes (50%)	2	1406 bp	43.81	4.69	82.36
sw_8_scaffold_11222 Phylum: Bacteroidetes (50%)	4	1404 bp	40.67	4.20	71.79
sw_8_scaffold_11278 Species: Mariniradius saccharolyticus (50%)	2	1400 bp	40.07	5.71	61.50
sw_8_scaffold_21503 Phylum: Bacteroidetes (66.67%)	3	1399 bp	41.67	5.08	68.48
sw_8_scaffold_27557 Phylum: Bacteroidetes (66.67%)	3	1393 bp	46.45	4.88	87.65
sw_8_scaffold_11379 Species: Fibrella aestuarina (50%)	2	1391 bp	46.37	5.10	92.52
sw_8_scaffold_11396 Species: Haliscomenobacter hydrossis (50%)	2	1390 bp	45.04	5.97	63.24

Displaying items 351-400 of 620 in total

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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