ggKbase home page

sw_8_scaffold_2358_4

Organism: SW_8_Salinibacter_ruber_63_12

partial RP 39 / 55 MC: 3 BSCG 31 / 51 MC: 2 ASCG 6 / 38
Location: comp(2222..3796)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=24656873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 525.0
  • Bit_score: 938
  • Evalue 3.80e-270
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=761659 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 524.0
  • Bit_score: 938
  • Evalue 5.40e-270
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 524.0
  • Bit_score: 938
  • Evalue 1.10e-270

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1575
TTCAAAGCCGTGCAGGACGGCAAGCAGGTCGCCATGCTCGTGCCCACGACCATTCTTGCCCAGCAGCATCACGAGACGTTCAGCAAGCGCTTAGAGCGCTTTCCGATGCAGGTGGAGGTATTGTCCCGTTTCCGCTCGCAGGCGGAGCAGACGGAGGTCTTGGAACGCTTAGAAAAGGGCCAGGTCGACATTCTGATCGGGACCCATCGCATCACGAGCGACGACATCGAATTCAACGATCTCGGCCTGCTCATCATCGACGAGGAGCAGCGCTTCGGGGTCAAGACGAAGGAGACCCTGCGCAAGATGCGGGAGGACATCGACACGCTCACGCTCACCGCCACGCCGATCCCCCGCACGCTGCAGTTCTCGCTCCTCGGGGCGCGAGACCTGTCGCTCATCGAAACGCCGCCCCCGAACCGGCAGCCCATCAACACGGAGATCCACACCTTCGACGAGGACCTGATTCGGGACGCCATCCGGTACGAAACGAGCCGCGGCGGGCAGGTCTTCTTCATCCACAACCGCGTCAAGACGATTAACGAGATCGCGGAGATGGTGCGGGCGATGGTGCCGGACGTGCGGGTGGGCGTGGGGCACGGTCAGATGAGCGCGACCGAGCTGGAGGACGTGATGGTCGACTTTCTCGACAAGAAGCTCGATGTGCTGGTCTCGACCTCGATCATCGAGAACGGCGTGGACATTTCGAACGCCAATACGATGATCATCAACCACGCGGGTGAGCACTTTGGGCTCTCGGAGCTCCACCAGCTCCGGGGCCGCGTGGGCCGGTCGCAGCGGAAGGCGTTCTGCTACCTGCTGGTGCCCTCCATCCACAGCCTCACCGACGACGCCCGCGAGCGCCTGAAGGCCGTGGAGCAATTCTCGGACCTCGGCAGCGGCTTCGACATCGCGATGCGCGACCTCGACATCCGTGGGGCCGGGGCGCTGCTGGGCGCGGAGCAGAGCGGCTTCATTGAGGACGTGGGCTACGAGACCTACCACAAGATTCTGGACGAGGCGATTAAGGAGCTGCGGGAGGAGGAGTTCGAGGACGTGTTCGACGGCGAGGCCGTGCCGCCGGGGCCGGAGACCTCGGTGGACGTGGAGGAGGACGCCTTCATCCCCGACGGCTACGTGCGGGACAACACCGGGCGCCTCAATCTCTACCGCCGCATCAGCGACGCGCCGGACGAGACGACGCTCGTGGATCTGCTGGACGAGATGGAGGACCGCTTCGGCGACGTACCGCCCCCGGTCCACAACCTCCTCAACGGCGCCCGGCTGCGGCTCCTCGGCGAGCAGTTGCGCCTGCCGAAGGTGATGTACAAGAACGAGCGGCTCTTCCTCTACATCCCCAGCGAAGACGCCGACCCGTACTTCTACGAAGAGGTCTTCCACCCGCTGCTGGAGAAGCTGTCTGTCATCGACCACGAGTACGTGATGAAGGACGACGTGGAGGGCGGCCTCATGCGGGCCATCGTGCAGGACGTACCCACGCTCGACGACGCGCTTCACGTGACGGAGTCCCTGCTTCTCGGAGAGACCGAGACCGTAGCGACCGTTGAGGCGTGA
PROTEIN sequence
Length: 525
FKAVQDGKQVAMLVPTTILAQQHHETFSKRLERFPMQVEVLSRFRSQAEQTEVLERLEKGQVDILIGTHRITSDDIEFNDLGLLIIDEEQRFGVKTKETLRKMREDIDTLTLTATPIPRTLQFSLLGARDLSLIETPPPNRQPINTEIHTFDEDLIRDAIRYETSRGGQVFFIHNRVKTINEIAEMVRAMVPDVRVGVGHGQMSATELEDVMVDFLDKKLDVLVSTSIIENGVDISNANTMIINHAGEHFGLSELHQLRGRVGRSQRKAFCYLLVPSIHSLTDDARERLKAVEQFSDLGSGFDIAMRDLDIRGAGALLGAEQSGFIEDVGYETYHKILDEAIKELREEEFEDVFDGEAVPPGPETSVDVEEDAFIPDGYVRDNTGRLNLYRRISDAPDETTLVDLLDEMEDRFGDVPPPVHNLLNGARLRLLGEQLRLPKVMYKNERLFLYIPSEDADPYFYEEVFHPLLEKLSVIDHEYVMKDDVEGGLMRAIVQDVPTLDDALHVTESLLLGETETVATVEA*