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sw_8_scaffold_1220_7

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 3700..4089

Top 3 Functional Annotations

Value Algorithm Source
SNF2 super family n=2 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MS83_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 112
  • Evalue 3.90e-22
DNA repair and recombination protein RAD54-like protein {ECO:0000313|EMBL:KFM27422.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenoc similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 137.0
  • Bit_score: 120
  • Evalue 1.50e-24
RAD54; SNF2 super family similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 112
  • Evalue 1.20e-22

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Taxonomy

Auxenochlorella protothecoides → Auxenochlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 390
GTGAATCATCCTAAGCTCATCCATGACATGCTGAACCAGCGAGGTAAGGAGGGACAAGATGATCCAGTTGCGGGCTTCGAGGATTGTGGATCCTTTTTCCCGGAAGGCCTGTTTGATTCAGGCAACGGCAAGCCAGCTTCAGGTTGGGAGAGCTCAAGCGGCAAGTTTCACGCCTTAACCAACTTGTTAGAATATTTGCGAAGGAATACAACGGACCGCGTCGTCGTTGTTTCGAACTTTACACAGACGCTCGATCTTGTCGCGCTTGCATGCAAAGAACATGGATGGCCAAATGTTCGACTGGACGGTATGCGCAGCAATCTTGCCCTAGCCATTTGTACAACTGCTGAGAACTTGCTGATTTCCTCTTGTGCTGGATTTCTACTTTAG
PROTEIN sequence
Length: 130
VNHPKLIHDMLNQRGKEGQDDPVAGFEDCGSFFPEGLFDSGNGKPASGWESSSGKFHALTNLLEYLRRNTTDRVVVVSNFTQTLDLVALACKEHGWPNVRLDGMRSNLALAICTTAENLLISSCAGFLL*