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sw_8_scaffold_12336_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1..966

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4DTU5_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 278.0
  • Bit_score: 132
  • Evalue 6.90e-28
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra019938.1-P}; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; similarity UNIPROT
DB: UniProtKB
  • Identity: 31.3
  • Coverage: 278.0
  • Bit_score: 132
  • Evalue 9.70e-28
hypothetical protein; K14297 nuclear pore complex protein Nup98-Nup96 similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 281.0
  • Bit_score: 128
  • Evalue 4.10e-27

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Taxonomy

Brassica rapa → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 966
GACACAGCTCCACTCCTGGTCGAGCGGAAAGATCCGCGCAAAATGTTCGTGCGTCAAGAACTGCCGAAGCCGGTCGACATGATGCAACAAGCTGAGCCAGCAGCACACCAGCAGCAGGAGGTTGTGCCGGCAGACATCGCTCCGTCGCCCTCTGACAACGACGCCGGGAGGCGGGATCAGCTCGGCCCGTCAAGCAACAACGTGGTTGAGAGAGACTCAGGAGCTGCGGATGGCGACGATGTGCGCAATGCGCCATCGCCTGTTCCGACGTACGAGGGAAAAGCCGCGCAGCAGAATGAGGAGGATGATCGCGAGCAGCGAACTGAGACTGTTCGGCCAAACGGAGGCGAGGCGGCCGCTCATGACACGAAACGCGTTTCAGAGCCCATCCGCCCCGCCGAGGCGCCGAAACTGACTGGTAAGGACTACTACACCAGCCCTAGCATGGGTCAACTCGCCGTCTGGAAGAAAACCCAGCCTGAGAAGCTTGCTGCTATCGAAGACTTGGTCGTTGGGCGTCGTCACTATGGAGAGCTTTGTTGGGAAGGGCAGACAGACGTGCGCGGCCTCGACCTCGACGCATTGGTGGACATCAGGCACGGCGAAATTGAGGTCTATCCAGATGGCGTAGTGAAGCCGCCTGTTGGACAAGGGCTCAACAAGCCATGCAGAGTGACGCTGCATTATGTCGGCAAATCACCGAAGCGGAGGAAGCCGCTTTCTGAAGGTGAGAGGAAGGATATGGAGCAGCAGCTGAGGAGCTTAGAGGGCACTCACTTCATCAAATACGATCCCGAATCCGGTGACTGGCAGTTCAAGGTGTGCCTGCTTGCGCGTGTTTCTCATGTGAACCCGCTGACCTCCAAGGCTGCAACCCCGATACGGGCTTATGCGCTTGCAGGTGGACCATTTCACAAAGTACGGCGCACCTTTTGTCATCGACGACGAGGAAGACGAAAAAGATGA
PROTEIN sequence
Length: 322
DTAPLLVERKDPRKMFVRQELPKPVDMMQQAEPAAHQQQEVVPADIAPSPSDNDAGRRDQLGPSSNNVVERDSGAADGDDVRNAPSPVPTYEGKAAQQNEEDDREQRTETVRPNGGEAAAHDTKRVSEPIRPAEAPKLTGKDYYTSPSMGQLAVWKKTQPEKLAAIEDLVVGRRHYGELCWEGQTDVRGLDLDALVDIRHGEIEVYPDGVVKPPVGQGLNKPCRVTLHYVGKSPKRRKPLSEGERKDMEQQLRSLEGTHFIKYDPESGDWQFKVCLLARVSHVNPLTSKAATPIRAYALAGGPFHKVRRTFCHRRRGRRKR*