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sw_8_scaffold_12516_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(3..1301)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4DQM2_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 402.0
  • Bit_score: 243
  • Evalue 3.70e-61
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo6g018680.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 402.0
  • Bit_score: 246
  • Evalue 8.10e-62
hypothetical protein; K14799 pre-rRNA-processing protein TSR1 similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 401.0
  • Bit_score: 237
  • Evalue 8.40e-60

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Taxonomy

Brassica oleracea → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1299
CCCTCCGCCCCCTCAGAGCTCACTCGGTCTCTCTGTAACTGCCAACCCTCTCCCCCTTCCTGGCGTTCCTCTCGTCCCTACCTGCTATGCCAGTACGCCGAGCTTGAGACTTCTCACAACAGCGTCACCCGCCTCGCTCTTCATGGATACGTCCGCGGACAGAGTTTCTCCGCCGACCAGCTCGTCCACCTTCCCGATCGCGGCGAGTTCCAGCTGCAGCGCATTGACGTCCTATGTGACCCTTACCCGCTAAAGCTGAAGCATCGCGCTTGCGCACACGCTAGGCCCGATGGAGATACGGATATGGAATCCAATAGGTGTCAGCAGTGCACCGTCTCGCTTCACCCTTCACCCGAGACGCAAGAATCGCTTCAGCGCGAGAATGTGTCCGACGAGCAGATGCGCGATGGCGATACTGCTGACCCTGATGGCGATGACAAGACATGGCCTACGGATGAAGAGATCCGTGCTGCCGAGGCTGAGCGTAGACGACTGAAGCAGAAAATGCAACCCGGAACGTCAGAGTACCAGAGTTCGTGGCTGCTTGATCAACGTCTGCATGACCTTTACGGTGGTGAGCAGAGCGAGGAAGGCATGGCAGATGCTGTAAGTGGAGAGCTTGACGATGAGCTCATGTCCGACAATGCACCAGAAGAAAGAGCTGTATCCGATGCATTCAATGCAATGGAGCAAGAAAGAGAGGATGACACCGAGACGATCAATGGTGGCGCATCGATCGTTGGTGATGCTAGTGACGATGCTCTGCTCGAAGATGATAAAGATAACGCCGAAGAGCATGAGAGAGAGAAGACTGAAAACGAGCGCCGAAAGCGCGAGCGAGAGATCATGGAAGATGCAGAATTCCCAGATGAAGTTGAAGCTCCCGAAGATCAACCTGCCCGCCGGCGATTCTCCAAATACCGCGCCTTACGCTCTTTTCGAACAACCCCGTGGAATGCAAGAGCAGACCTTCCACAGGAGTACAACAAGATCTTTGCATTTGATAGCCTTCGACGGGCTCAGAAATTAGCTGCTGAAGAACAACGAGAGCGATCTGAGCGGGATAATGCCGCACCCATTGGAAGCTTTATTCGTCTTGTCCTTGAGGGATTGTCAACTGATGTCGCTCAAGAGGTTGTTGCTCAAAACGCACCTCTTACAGCACTTGGGTTGCTTTTGCATGAAGGAAAGCTATCTGTGAACCACTATCGCATCTCGCTTTATGAGGACAGCGCCGTCACGCCCCATACTTGCGAGTTTGGAGACGACCATGAGAATGTGAATCACACGCGTGGGCTT
PROTEIN sequence
Length: 433
PSAPSELTRSLCNCQPSPPSWRSSRPYLLCQYAELETSHNSVTRLALHGYVRGQSFSADQLVHLPDRGEFQLQRIDVLCDPYPLKLKHRACAHARPDGDTDMESNRCQQCTVSLHPSPETQESLQRENVSDEQMRDGDTADPDGDDKTWPTDEEIRAAEAERRRLKQKMQPGTSEYQSSWLLDQRLHDLYGGEQSEEGMADAVSGELDDELMSDNAPEERAVSDAFNAMEQEREDDTETINGGASIVGDASDDALLEDDKDNAEEHEREKTENERRKREREIMEDAEFPDEVEAPEDQPARRRFSKYRALRSFRTTPWNARADLPQEYNKIFAFDSLRRAQKLAAEEQRERSERDNAAPIGSFIRLVLEGLSTDVAQEVVAQNAPLTALGLLLHEGKLSVNHYRISLYEDSAVTPHTCEFGDDHENVNHTRGL