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sw_8_scaffold_1797_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(4018..6135)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Populus trichocarpa RepID=B9IQE4_POPTR similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 755.0
  • Bit_score: 446
  • Evalue 4.70e-122
MLH1 {ECO:0000313|EMBL:AIU48211.1}; Flags: Fragment;; TaxID=85856 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Magnoliidae; Magnoliales; Ma similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 728.0
  • Bit_score: 474
  • Evalue 2.30e-130
DNA mismatch repair protein MutL similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 557.0
  • Bit_score: 221
  • Evalue 9.10e-55

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Taxonomy

Magnolia denudata → Magnolia → Magnoliales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2118
ATGGCGAGGGAGGGGGGGGAAGGAGGTATCCGAATACTACCAGATGACGTGGTGAACAGAGTAGCGGCTGGAGAGGTGCTCCAGCGTCCGAGCTCGGCGTTGAAGGAGCTCGTGGAGAACGCGCTCGACGCCAGCGCCTCTCGCATCGCGCTTACAGTCAAAGACGGTGGTAACAAGCTCCTTACTGTGCAAGACGACGGTCGTGGCATCAGCTCTGATGACCTGCCGCTCCTGTGCGCCCGTCACGCAACCAGCAAGCTGCGCTCATTTGAAGAGCTTCCACGGGCCTCCACCCGCTCCTTCGGCTTCCGTGGCGAAGCTCTTGCCTCCATGTCCTTCGCTGGTCGCGTCACTGTCACCTCCATGCGCCCTTGCGACCCGCATGCTCTCTACTGCTCCTTTCGTAACGGCGTTCCTGAGTCCAACCCTTCCCCTTGCGCCGGAGTTCCTGGCACTATCATTTCGGTCGAGGACATCTTCGTTACCATGCCCGCTCGTCGCCGCGCTCTCCGCCCCGCTCCGGAAGAGTACTCGTCCATCCTTTCATCCCTTCAGCGCTACGCCTGCTTGCACTACTCAGTCGCTTTCACCGCTCGCAAGCACGGCGGGCCACGTGCTGACCTCAACCTCCAACCCACCTCCTCTCGCCTTGAGCGCATCCAAGCTTTGCATGGCCTTCCGTTGACTCGCGAGCTCATTCACTTCAACATCCCCGACAACTCCGATGAGAGTCACAATAAAAGCGACAATAGTAATAATAACAACAACAGCAAGGAAGAGTTCAAATGCGAGGCGCTGGTGTCCAAGTGCAGCTGTGAGAACAAACGCTCCACCTTCTCCTTCTTCGTAAACGGCCGGCCGGTTTCCTGTGCCCCGCTTCGCAAAGCAGTTGAAGCAGCTTATACCTCTACCATCCCAAAGCAAGTGAAGCCATTCGCAATGCTCTTCCTGTCGCTTCCACCAGAGCATGTGGATGTGAACGTGCATCCGACAAAAGAGGAGGTGCACTTCATGCATCAGGAGGAGATTGGGGACTGTGTCCATCAGAGCATCCAGCGCAGGCTGCTTGAGACCAATACTACTCGCACCTTCAACCACCGACGGCTGACAACGAGCGCACCGGAAGCACCGCCCGCTGCTGTTCCTCCTCCAAGTGAGCGGCAGCATCACCGAAAAGCAGATAGCATAGGCGGCAGAAAGCACCAGCGAAGCAGTGAAAATGAAGGAGCTTCAAGTGGCACTGGCGAAGTGTATGAGAAGGACATGGACCGCTCAGATCCGAAAGCGCGCAAGCTTGATGCATTCTTCACACAGTATGACAGAAGATCAGAAGATGCGAATGGAGCTGCTGATCGGAATCGAGCTGACATGGGATCCTCTCCTTCGGGCAACAGACGACACAGCTGTGGCTGGAGCGAACCTGAGCTTGCTTCCGTCGATGACCTTCTCGCTGAAGCTGAAGAGCGCTCACACTCAGGCTTGAATGAAGTGCTCTCCGAACATACCTTTGTCGGTATGGCTGATGGCACATTCGCGCTGATGCAGCACAGAACCAAGCTCTACCTCGCATCGCTTCCTGTACTTACTCAAGAGCTCATGCGTCAGCAGGCCATCCGTGGTTTAGGACAGTTCAGATGCATGCGTTTGAGTTCCCTTTTCCAGCGGAAAGAGCTACTAAGTGACTGCTTTTCTCTTGACATCGATGAGGAAGGCAACCTTAGATCGATGCCAGTACTTGTCGAACAGTACCAGCCACCAATTGACAGAATACCAGAGCTACTGCTTAGCATAGCGTGTGATGTTGACTGGGGTCAGGAGAAAGTCTGCTTCTCCTGCATTGCTGCAAAGCTAGGTGATGCGTATGCTGTTGGCCCGCTTGATGCATTTGATTTTCGCAACGCAGCAACGCTCGATGGCAATGAAGCAGGTACGGCAAGTGGGGAAAAGGCAGAATCAATGGGAGAAGACCACTGCGAATCCAATGAGTGGCTGCTCAAACATGTGATTTTCCCAGCAATGTCCGATTATCTCTATCCTCCTCAGAGTTTCGCTGTCGATGGTCACGTGATGCAAGTCGCTTGTTTAGAGCGCCTCTACAAAATTTTTGAACGTTGCTAG
PROTEIN sequence
Length: 706
MAREGGEGGIRILPDDVVNRVAAGEVLQRPSSALKELVENALDASASRIALTVKDGGNKLLTVQDDGRGISSDDLPLLCARHATSKLRSFEELPRASTRSFGFRGEALASMSFAGRVTVTSMRPCDPHALYCSFRNGVPESNPSPCAGVPGTIISVEDIFVTMPARRRALRPAPEEYSSILSSLQRYACLHYSVAFTARKHGGPRADLNLQPTSSRLERIQALHGLPLTRELIHFNIPDNSDESHNKSDNSNNNNNSKEEFKCEALVSKCSCENKRSTFSFFVNGRPVSCAPLRKAVEAAYTSTIPKQVKPFAMLFLSLPPEHVDVNVHPTKEEVHFMHQEEIGDCVHQSIQRRLLETNTTRTFNHRRLTTSAPEAPPAAVPPPSERQHHRKADSIGGRKHQRSSENEGASSGTGEVYEKDMDRSDPKARKLDAFFTQYDRRSEDANGAADRNRADMGSSPSGNRRHSCGWSEPELASVDDLLAEAEERSHSGLNEVLSEHTFVGMADGTFALMQHRTKLYLASLPVLTQELMRQQAIRGLGQFRCMRLSSLFQRKELLSDCFSLDIDEEGNLRSMPVLVEQYQPPIDRIPELLLSIACDVDWGQEKVCFSCIAAKLGDAYAVGPLDAFDFRNAATLDGNEAGTASGEKAESMGEDHCESNEWLLKHVIFPAMSDYLYPPQSFAVDGHVMQVACLERLYKIFERC*