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sw_8_scaffold_1913_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(4544..5032)

Top 3 Functional Annotations

Value Algorithm Source
prolyl-tRNA synthetase (EC:6.1.1.15) similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 146.0
  • Bit_score: 126
  • Evalue 9.20e-27
PREDICTED: bifunctional glutamate/proline--tRNA ligase n=1 Tax=Sorex araneus RepID=UPI0003315638 similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 100.0
  • Bit_score: 163
  • Evalue 2.40e-37
Suspect SCG annotation. See neighboring gene [sw_8_scaffold_1913_3]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 489
GTGCAGAAGGAGACAAAGCTCGGGTTGCAGGCGAAGAAGGAGGAGGATTTCGGGCAGTGGTACTCAGACCTTGTGACCAAGGCGGAGCTGATTGAGTACTCAGACATCAGTGGGTGCTACATTCTGAGGCCATGGGCCTTCTCAATCTGGGAGGCCACAAAGGATTTCCTTGACACGCACATCAAGCAAATTGGCGTCGAGAACTGCTACTTCCCACTCTTCGTATCGGAGCGAGCGCTCACATCTGAGAAGGAGCACGTGGAGGGCTTTGCACCCGAAGTCGCCTGGGTAACTCACTCCGGTCCGTTTCCATCAACCCGTGATCATCCATCGCACCACCAGTCCTGCAAAATCTACAGTGCTCCCTACCACTCTCCGCCCGCAGGCGACCAGAAGCTCGAGCAGCCCATCGCCGTAAGGCCCACCTCCGAGACAGTGATGTATCCAAGTGCGCTGCTGGCCTTTCCCTCCGCTCCAGCCCACCGCTAA
PROTEIN sequence
Length: 163
VQKETKLGLQAKKEEDFGQWYSDLVTKAELIEYSDISGCYILRPWAFSIWEATKDFLDTHIKQIGVENCYFPLFVSERALTSEKEHVEGFAPEVAWVTHSGPFPSTRDHPSHHQSCKIYSAPYHSPPAGDQKLEQPIAVRPTSETVMYPSALLAFPSAPAHR*