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sw_8_scaffold_2036_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 4985..8587

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 999.99
  • Bit_score: 908
  • Evalue 1.40e-260
DNA-directed RNA polymerase (Fragment) n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1EFA8_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 999.99
  • Bit_score: 908
  • Evalue 9.80e-261
DNA-directed RNA polymerase, subunit B' similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 735.0
  • Bit_score: 329
  • Evalue 4.10e-87

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Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 3603
ATGAAGCTCTACCGGAGCAAGCTCGCCTCCAAGCGAGAAAAAGCTAATACTGCTAATGGTATCAACATCGAGAGATCCCTGGCCTACCTGATCCAGCAGCAAGAGCAGCAGCAGCGTGAGAAGTCTCGCGTCGACCGGATGTCTGGCGCTCATGAGAATGGCAGCGTCGCGGAAGAACGAGACAAGGAAGATGAAGAGCTTACCCTGCCTTCGAGCCGTGGTGCTGAGGGCGCAGAGTCTGAAGGAAGTGAAGAAGATGAGGATGGCGATGACGATACAGGCTGTATCGAAGATAGTGATGGCGGTCAGGCGAAGCAGCAGCAGCAGCAGCAGCATGGTCTGGATGACAGCTCTCGTCATCGGCAGTACATCAGCCCAACGGAGGCAAGGGCTATCATTCAGGCGCTCTGGGCGAACGATACAGAGCTCGTGCGCTCAATCTATATGCTTGAGGTGCCAAACAAATGTGCTCAAGCTGCTCATGCTCATGTTGGCGCTGCAGCATCCGATAGCGCATGCAAGCTGTTCATGAGCAAAATCCTTGTGCCGCCGAACAGATTCAGGCCGCACGCGATTATGGATGGCGAGCTCATCGAGCACCCGCAGAACACGTATCTTGGCAGGCTGCTGAACGCTAAGGTCGCGATGGACGAGCGCACCGCATATAGGCGCCGTCTTCTCAACCTGTTGAACGACATGCAAACCAATGTGAACAAGCTGCTCGACAGCAGTGCTGGTGCAACGGGCAACGCAGACGCAACTGGTATACGGCAGCAGCTGGAGAAAAAAGAGGGCCTCTTCCGCATGAATCTGATGGGAAAGCGAGTCAATTTCGCTGCGCGAAGCGTTATTTCCCCTGACCCGCACATCCATCCAGAGGAGATCGGCGTACCGCCTTTCATCGCAACGCGCTTGACATTTCCAGAGCCTGTAACCAAACACAATAGCGAAAAACTGAAGCAGCTTGTTGAGAACGGCGCCGACTGCCACCCTGGCGCAACTGCAGTGGAGGACGAGCACGGTCGGGTGGTGGATCTGACACGCATGCCACTTGGCAAGCGTCGAGGTGCTGCGCTGCTTCTGACCTCACCGCCTGCGACGAAGCGTGATGCCGCCGGTTCGACGGGTCGCAAGCCTGCCTTCCCAAGCAAGGCAGTGCATCGCCACTTGCGGGACGGTGACATGCTTCTGATGAACCGACAGCCCACGCTACACAAGCCCGGTGTGATGGCACACAGAGCGCGCATCTTGCGTGGGCAGCGAACGTTACGATTGCACTACGCCAACTGCAGCACATACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACTTATGCCAGGACCAGCTTGGAAGAGCCGAAGCGAACTACATCGTCAATGCCAACAGGCAGTACACAGTTCCAACCGATGGAAAGCCGCTGCGAGGCTTGATCCAAGACCATGTTGCATCCGGTGTGCTTCTGACGATGAAGGACACCTTCATGCCAAAGGAGAGCTTCTCACAGCTTTTGATCATCGCGTGTGAAGCAATAAATTCATCTCAGGCACGCAGGCGTCCGTCTACTAGTGGTGGCATCAGTACCAATGGCGCTGGCATTGATACCGTGCGATCAAAAGCAGAGTTGCGAAGCAGGCGTCGGATCCGAATACCAATTCCAGCGGTGCTCAAACCGATGAAGCTGTGGACAGGCAAACAGCTCATTGGCGCCATCCTTGACGAGCTCACGCACGGCAAGCAGACGCTGTCGATGGAGAGCAAGCCCAAACTTCCAGTGCAATACTTTGGTGAAGCATCCGGTGAAGGCAAGCTTGAGATCCGCAACAACAGGCTCGTACGCGGCGTGGTGGACAAGGCAGCATATGGTAATACCTCAATGGTCCATGCTGTGCACGAGTTGTACGGCCCAGATGTGGCCGGCGATTTGCTCTCGGCGCTCTCTCAAGTCTTAACTGTATTTTTGCAGTCGCATGGATTAACATGCGGTGTGGACGACCTTCTCATCACCCGTGAAACTGAGAAAAAGAGGGAAAACATGCTATCACAAGCTGACGATGAGAGTGCAAAGGTTGCCGCTGAGTTTGCTGGTTGTGATCCGAGCGTTGGTGACGAGAAATTGCGCTCGATGCTACGGGAGCGCCTTCATGAGCGTCCGCAGGGCGAGGTTGACCTTGATATGCGCACATCAGGCGCGCTTAGCCCCATCACGAGCGACACGATGCAGTCGTGCCTACCGGCTGGGCAGCAGAAGCCGTTCCCAAGGAATCAGCTTTCACTAATCATCTCGACTGGCGCGAAGGGCTCGCTTGTGAACCATTCGCAGATTGCCGCTCTCCTTGGGCAGCAAGAGCTTGAAGGTCGCCGCGTGCCCCGAATGAGCAGCGGTAAGACGCTGCCGTGCTTCAAGGCGTTTGACACCTCTGCTCGTGCTGGCGGTTTTGTAACAGACAGATTTCTGAGCGGGCTTCGACCGCCGGAATATTTCTTCCACTGCTTGGCAGGGCGTGAGGGTCTTGTTGACACTGCCGTGAAGACTGCGCGCTCAGGGTACCTGCAGCGGTGCATCATGAAGAACCTAGAGAGCCTGCAGGTTGCTTACGACGGCAGTGTGCGGGACTGCGATGGCTCGTTGATGCAGTTGAAGTACGGGGAGGACGGAATCGACAATACCCAGACGGCATACCTGGACAAGATGGACTTCTATGTGAAAAATGCTGCGCGCATGGAAGAATTGTACGGCAACACTGCCGACGCGTTGCGGCAGCGGCTTAACTCCAGTGAGCGCACTAATGCGTCACTGCCAGAGCAGCTTGTCGCCAGAATTGATGAGGCTGCGCGCAAAGCAGTTGTTTCAAGCAAACCAGGACTGCATAGCGAGCAGCACTTCAGGCATTTCTCGGAGCTAGTGCGGGCGCGGTTGGAGCGAGCACAAATGGCACCCGGGGAACCGTGTGGTGTGCTGGCTGCTCAATCGATGGGCGAGCCATCGACTCAGATGACTCTTAACACGTTCCACTTCGCTGGTCGAAGCGGTGCAAACGTCACGCTCGGCATTCCACGTCTGAGGGAGCTATTGATGACAGCATCAAAGAACATCTCGACGCCTGTCATGACGCTGCCTATCTCTTCCGGACGACGCAAGGACGCTGACTCTATCGCTTCTAGCCTAAGACGAACGACGATGGCCGAGCTGCTCGAAAGCATCCGTGTGATTGAGCGTAACAAGCTAAAGTCCCGATCAGGCAACGCTGACGACTTGCGTGACTCAAGCGATCCCGAAGCGGTTTCTGTGCCTCGCCGGGAGTACACGGTTGTTGCCACGTTTCGTGTGCCTTCGTCAGTGGATACAAAGGATGATTCTGATGGAAGAAGCCAAACAGCGGAAGCGGTGTCCGGGGAGCATCAGGGCAGCGTCTCAGATTGTGCGGCTTCTGACAAGATGCAAGCAATACAGTTCTCTGAGATGCACTCGTGCTTTCATGGTGCATTCTTACAAAAGTTCTATCAGGCTTTGAAAAGCGAGGTGCGGCGCATGGCAAACGTCAACATCTCTTCAAAACGTGAGCGAACGTCAAGGGCAACAGACGAGCAAGCTGAGGCT
PROTEIN sequence
Length: 1201
MKLYRSKLASKREKANTANGINIERSLAYLIQQQEQQQREKSRVDRMSGAHENGSVAEERDKEDEELTLPSSRGAEGAESEGSEEDEDGDDDTGCIEDSDGGQAKQQQQQQHGLDDSSRHRQYISPTEARAIIQALWANDTELVRSIYMLEVPNKCAQAAHAHVGAAASDSACKLFMSKILVPPNRFRPHAIMDGELIEHPQNTYLGRLLNAKVAMDERTAYRRRLLNLLNDMQTNVNKLLDSSAGATGNADATGIRQQLEKKEGLFRMNLMGKRVNFAARSVISPDPHIHPEEIGVPPFIATRLTFPEPVTKHNSEKLKQLVENGADCHPGATAVEDEHGRVVDLTRMPLGKRRGAALLLTSPPATKRDAAGSTGRKPAFPSKAVHRHLRDGDMLLMNRQPTLHKPGVMAHRARILRGQRTLRLHYANCSTYNADFDGDEMNLHLCQDQLGRAEANYIVNANRQYTVPTDGKPLRGLIQDHVASGVLLTMKDTFMPKESFSQLLIIACEAINSSQARRRPSTSGGISTNGAGIDTVRSKAELRSRRRIRIPIPAVLKPMKLWTGKQLIGAILDELTHGKQTLSMESKPKLPVQYFGEASGEGKLEIRNNRLVRGVVDKAAYGNTSMVHAVHELYGPDVAGDLLSALSQVLTVFLQSHGLTCGVDDLLITRETEKKRENMLSQADDESAKVAAEFAGCDPSVGDEKLRSMLRERLHERPQGEVDLDMRTSGALSPITSDTMQSCLPAGQQKPFPRNQLSLIISTGAKGSLVNHSQIAALLGQQELEGRRVPRMSSGKTLPCFKAFDTSARAGGFVTDRFLSGLRPPEYFFHCLAGREGLVDTAVKTARSGYLQRCIMKNLESLQVAYDGSVRDCDGSLMQLKYGEDGIDNTQTAYLDKMDFYVKNAARMEELYGNTADALRQRLNSSERTNASLPEQLVARIDEAARKAVVSSKPGLHSEQHFRHFSELVRARLERAQMAPGEPCGVLAAQSMGEPSTQMTLNTFHFAGRSGANVTLGIPRLRELLMTASKNISTPVMTLPISSGRRKDADSIASSLRRTTMAELLESIRVIERNKLKSRSGNADDLRDSSDPEAVSVPRREYTVVATFRVPSSVDTKDDSDGRSQTAEAVSGEHQGSVSDCAASDKMQAIQFSEMHSCFHGAFLQKFYQALKSEVRRMANVNISSKRERTSRATDEQAEA