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sw_8_scaffold_2179_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 3..242

Top 3 Functional Annotations

Value Algorithm Source
TRL21 n=1 Tax=Capsella rubella RepID=B2BXW3_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 78.0
  • Bit_score: 85
  • Evalue 2.40e-14
TRL21 {ECO:0000313|EMBL:ABW81150.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; ros similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 78.0
  • Bit_score: 85
  • Evalue 3.30e-14
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 7.40e-14

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 240
CGTGTGAATGCCGTCAGCCCTGGATTCGTCGCCACCTCGCTCACACAGCACCGCCTCCGTGATGAAGCGTTCCACAGCAACATCACCAGCCGAACGCCTTTAGGCCGTGTTGGCCATCCTTCAGAGATTGCCGAGCCGATCCTCTTCCTGCTCTCCAACAAAGCGTCGTTCATCACTGGTCAGGCTCTCACAATTGACGGTGGACTGACGTGCTCGAGCTTCTGGACTGAGCCACAATAG
PROTEIN sequence
Length: 80
RVNAVSPGFVATSLTQHRLRDEAFHSNITSRTPLGRVGHPSEIAEPILFLLSNKASFITGQALTIDGGLTCSSFWTEPQ*