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sw_8_scaffold_2547_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(1682..5314)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: splicing factor 3B subunit 1-like n=1 Tax=Solanum lycopersicum RepID=UPI0002BCC05C similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 999.99
  • Bit_score: 1550
  • Evalue 0.0
Splicing factor 3B subunit 1 {ECO:0000313|EMBL:JAC62301.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 999.99
  • Bit_score: 1557
  • Evalue 0.0
splicing factor 3B subunit 1-like similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 999.99
  • Bit_score: 1550
  • Evalue 0.0

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 3633
GTGGGGCGCGAACAAGGCTACGCAGAGCGAGTCAAACGTGAAGGCCATACAAAGAAGTGGCTTGCCAGGGAAAGCTNNNNNNNNNNNNNNNNNNNNNCCGCCAAGGTGGCGCAGAAGCTGCGCAGCTACACCGCGCCCAAAGAGCTCCTTGAATCACGGCCAACCGCTGACGCCGAGGCGCCCAGTGGCGACTCCGCCGCCGAGAACCGCCTAGCCCGCTCGCGCATCGCCGACCGCGAGAACGAATACAAACGCCGCCGCTTCAACCGCCCTCTCTCCCCCGACCGCCACGACCCTATCGCCAACTCCTCTGAGACACCCGCTGATGCTCGCTCCTTCGCCGAGGTCATGCGCGCTCAGCAGAGAGAGCAGACAGAAAAAGAGCAACCAGAGTCCACACACTCTACCTCTCAGCAGCACGGCTCCTCGACCTCCGATCATGTTCATGCCTCGCGCAAATACCGACATTGGGACCACGAATCCTCCACCTCTGACGCTCCTACCGAGCATGCCGACAGCAACAGTCACGCCGATGCCAACGGTGCTCCGCCTCAGCCTAAGAGCCAGCATGTCGATGAATCATCTGATTGGGAGAACGACAGCGAAACGCAATCACATCATAGCACCAGCGCCGCTGCCTCTACGCCCACGCCACGTCGTCGCAGCCGCTGGGACCAGACGCCAGACCCATTGCCCGGATCGAAGCGCGGCCGATCCAGATGGGACCAAACACCAGAGCATTCTGCTGCGACACCGCAAGGTGCTGGTGGCGCAACACCCACGCCTGTAAATGCTGACGGTGCCACACCCGTTCGACCGGCCGAACCCGCAACACCGGAACAAAAGATCCGCGCTCGACACGAGCGTGAAATTGCTGAACGAAATAAGCCCCTTACAGACGAGGAGATCGACGCTATACTGCCCAGTGAAGGCTACGAGATCATCGAGCCGCCTGCCGACTATGAGCCTGTGCAAACACCAGCGCGCAAGCAGATAGCCACACCGACACCTGTAGATGCCTCCGTGGACGGCCAAGTGTACCAGATGCCTGGCCAGAGCATGAACGCGAGCCAGTATGGCATTGCGCAAATGCCGGAGGGGCTTCCAGAGCTTAAATCGGATGCAGATATGGAGTATTTTGGCCCACTTATGCGCGAAGCAGAGGAAGAAGAGCTCACTCTTGAACAGCTTAAGGAAAGGCGCATCATGAAGTTGCTTCTAAAAGTGAAGAATGGAACACCTCCACAACGGAAGGCATCTCTCCGTCAGATTACCGAAAAAGCGCGCGAATTTGGTCCGGGGCCACTCTTCAATCAGATACTCCCGCTGCTAATGAACCCTGAGCTCGAAGATCAAGAGCGCCACCTCCTGGTCAAAGTGATTGACAGGGTTCTGTATAAGCTGGATGAGCTTGTGCGTCCTTACGTACACAAAATTCTAGTGGTCATTGAGCCGATGCTCATCGACGAGGACTATTTCGCGCGCGTGGAAGGGCGCGAGATAATCTCGAATCTGGCCAAAGCTGCTGGACTGGCCACAATGATTGCGGCGATGCGCCCGGATATCGACAACGTGGATGAGTATGCGCGCAACACAACGGCGCGCGCCTTCGCTGTTGTCGCTTCTGCGTTGGGCATACCTTCGTTGCTGCCGTTTCTGAAAGCTGTGTGCGCAAGCAAAAAGAGTTGGCAAGCTCGCCACACCGGTTCAAAAATCGTACAGCAGACGGCAATCCTTATGGGCTGCGCAGTGCTGCCGCATGTGCGATCGCTTATTGAGATAATTCGGGGAGGGCTCAATGACGACAATCAGAAGGTTCGGACAATTACCGCGCTTGCAATTGCCGCACTCGCAGAGTCATCCCATCCGTACGGCATTGAATCGTTCGACAGCGTACTCGAGCCTTTATGGAGAGGAATCAGAACACTACGTGGCAAAGTTCTTGCGGCATTTTTGAAGGCCATTGGCTTCATCATCCCGCTTATGGACGCCGTGTACGCCGACTACTATACCCGCGAAGTTATGGTGGTGCTCATTCGGGAGTTCCAAACAACGGATGAAGAGATGAAAAAGATCGTGCTTAAAGTTGTGAAGCAGTGCGTTGGAACTGACGGCGTTGAGCCTGAGTATATCCGCACTGAGATTGTGCCGGAAGTGTTCAGGAACTTCTGGAGGCGGAAGATGGCGCTCGATCGTCGCAATTACAAAGCAGTGGTTGAAACGACCGTCGAGCTTGCAATGAAAGTGGGATCGTCTGAGGTTGTATCACGTATCGCTGAGGATCTCAAGGACGAGTCGGAGCCGTACAGAAAGATGGTGATGGAAATGATCGATCGTGTCGTTCGAGATCTCGGCACAGCGGATTTGGACCAGAGGCTCGAGGAGGTGCTTGTAGACGGCATCCTATATGCGTTGCAGGAGCAGACTAGCGAGGGGCACAATGTGATCTTGAACGGCTTTGGCACTGTCGTCAATGCACTCGGAGAGCGTTGCAAGCCTTTTGTTCCACAGATATGCAGCGCCATTAAGTGGCGGCTGAACAATAAGAATGCGCAAGTGCGGCAGCAGGCTGCAGACCTGGTCACGAAAGTCGCACCAGTCTTGCAAGAGTGCAACGAGGAGAAGCTACTTGGACATCTTGGCGTCGTACTACACGAGTACCTCGGCGAAGAATATCCCGATGTGCTCGGGAGTATTATTGGTGGCCTGAAGGCGGTTGTGAACAATATTGGTATCTCGCGTATGACGCCTCCGATTAAGGACCTTTTGCCCAGGCTCACGCCCATCCTTCGGAATCGACATGAGAAAGTGCAGGAGAATGTGATTGACCTTGTTGGCCGAATTGCGGACAGAGGACCCGAGTATGTGGCGTCGCGAGAATGGATGCGCATCTGCTTCGAGTTGCTCGACATGCTCAAAGCACCGAAAAAGTCCATCCGGAGGGCAACCGTCAATACCTTCGGGTATATTGCGAAGGCAATCGGCCCGCAAGACGTGCTCGCAACGCTGCTGAACAATCTGAAGGTGCAGGAGCGGCAGAGCCGTGTGTGCACAACTGTGGCAATCGCGATCGTAGCAGAGACATGCTCTCCATTCACGGTGCTTCCGGCGCTGATGAACGAGTACAGAGTGCCTGAGCTAAACGTGCAAAATGGCGTTCTCAAGTCGCTCAGCTTTCTATTCGAGTACATAGGAGAGATGAGTAAGGACTACATCGCCGCGGTGACGCCGGTGCTGGAAGATGCGCTCATGGATCGTGACCTTGTGCACAGACAGACGGCGGCGGCGACGGTAAAGCATCTGGCATTGGGCACGACGGGTTTGTCGTGTGAGGAGGAGCTGACGCACTTGCTCAACCACGTGTGGCCAAACATTTTCGAGACGTCGGCACACCTTATAAATGCGGTGCTGGAGGCGATCGAAGGCTGCAGGCTGGCGCTGGGGCCAGGAGTGATAATGGCGTACACGGTGCAGGGGCTGTTTCATCCGGCAAGACGGGTTCGAGATGTGTACTGGCGCATATACAATTCGCTGTACATAGGGGCACAGGATGCGTTAGTGGCATTCTACCCGGACCTGTACGATGAGGAAGATAAGACGTACCATAGGCACGAGCTGGATGTCTTTGTTTAA
PROTEIN sequence
Length: 1211
VGREQGYAERVKREGHTKKWLARESXXXXXXXXAKVAQKLRSYTAPKELLESRPTADAEAPSGDSAAENRLARSRIADRENEYKRRRFNRPLSPDRHDPIANSSETPADARSFAEVMRAQQREQTEKEQPESTHSTSQQHGSSTSDHVHASRKYRHWDHESSTSDAPTEHADSNSHADANGAPPQPKSQHVDESSDWENDSETQSHHSTSAAASTPTPRRRSRWDQTPDPLPGSKRGRSRWDQTPEHSAATPQGAGGATPTPVNADGATPVRPAEPATPEQKIRARHEREIAERNKPLTDEEIDAILPSEGYEIIEPPADYEPVQTPARKQIATPTPVDASVDGQVYQMPGQSMNASQYGIAQMPEGLPELKSDADMEYFGPLMREAEEEELTLEQLKERRIMKLLLKVKNGTPPQRKASLRQITEKAREFGPGPLFNQILPLLMNPELEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPMLIDEDYFARVEGREIISNLAKAAGLATMIAAMRPDIDNVDEYARNTTARAFAVVASALGIPSLLPFLKAVCASKKSWQARHTGSKIVQQTAILMGCAVLPHVRSLIEIIRGGLNDDNQKVRTITALAIAALAESSHPYGIESFDSVLEPLWRGIRTLRGKVLAAFLKAIGFIIPLMDAVYADYYTREVMVVLIREFQTTDEEMKKIVLKVVKQCVGTDGVEPEYIRTEIVPEVFRNFWRRKMALDRRNYKAVVETTVELAMKVGSSEVVSRIAEDLKDESEPYRKMVMEMIDRVVRDLGTADLDQRLEEVLVDGILYALQEQTSEGHNVILNGFGTVVNALGERCKPFVPQICSAIKWRLNNKNAQVRQQAADLVTKVAPVLQECNEEKLLGHLGVVLHEYLGEEYPDVLGSIIGGLKAVVNNIGISRMTPPIKDLLPRLTPILRNRHEKVQENVIDLVGRIADRGPEYVASREWMRICFELLDMLKAPKKSIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQSRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMSKDYIAAVTPVLEDALMDRDLVHRQTAAATVKHLALGTTGLSCEEELTHLLNHVWPNIFETSAHLINAVLEAIEGCRLALGPGVIMAYTVQGLFHPARRVRDVYWRIYNSLYIGAQDALVAFYPDLYDEEDKTYHRHELDVFV*