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sw_8_scaffold_27224_2

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(912..1574)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YX6_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 244.0
  • Bit_score: 181
  • Evalue 1.20e-42
Ribosomal protein L4/L1e {ECO:0000313|EMBL:CEF99633.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 235.0
  • Bit_score: 182
  • Evalue 7.30e-43
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 195.0
  • Bit_score: 152
  • Evalue 1.20e-34

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Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 663
CAGGACAGAGTGGTTTCTGTGACGCACCTACTCGGACCCTCTGAGCAGCGCGAACAGCGCCTCGCTGGCGCAGTGTGGGATGTACCCTTACGGGTGGACATCGCGCAGCGCGTGGTGGAGTGGCAGCGCGCTAAGCAACGCGCTGGCACCGCCTTTACCAAGTCACGTGCAGAGGTTGCTGGCACCACTGGCAAGCCCTTTAGGCAGAAAGGCACCGGCAACGCCCGCGCCGGTGACCGCAAAGCACCCCATCACAACCGCGGCGGCAAGGCCCACGGCGCCGTGCCTCGCTCCTTCTCGTACACGCTCCCCAAGCAGATCAAGCGTTTCGGTTTGAAAGTTGCGCTCAGCGCACGCCTTGCGGAAAGTCGCTTGAACGTGGTCGACTCTCTGTCGCACATTGGCCCCAAGACTAAGGCGTTTAAGCAAGCCCAGCCCCGGCTCGCAAGCAGCGCTGCTGGCAAGAATACGATGCTCCTTGTACTCGGGAACGATGAGGACATGCAAAGCATCACCAAGGCCACCTCTAACGTGCAGGGGATTGAAGTGCTGCCAGCACGAGGTACGAACGTGCTCTCCATCCTTAGACGGCAATCGCTTGTTGCAACGCCGGCCGCAATTGGTGATCTGGAGAAACGCCTCACCACGCCCATCAATCGATAG
PROTEIN sequence
Length: 221
QDRVVSVTHLLGPSEQREQRLAGAVWDVPLRVDIAQRVVEWQRAKQRAGTAFTKSRAEVAGTTGKPFRQKGTGNARAGDRKAPHHNRGGKAHGAVPRSFSYTLPKQIKRFGLKVALSARLAESRLNVVDSLSHIGPKTKAFKQAQPRLASSAAGKNTMLLVLGNDEDMQSITKATSNVQGIEVLPARGTNVLSILRRQSLVATPAAIGDLEKRLTTPINR*