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sw_8_scaffold_2980_1

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(3..668)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA mismatch repair protein MSH2-like n=1 Tax=Cucumis sativus RepID=UPI0002B42A81 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 228.0
  • Bit_score: 192
  • Evalue 5.10e-46
Uncharacterized protein {ECO:0000313|EMBL:KGN63799.1}; TaxID=3659 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 228.0
  • Bit_score: 192
  • Evalue 5.40e-46
DNA mismatch repair protein MutS similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 201.0
  • Bit_score: 136
  • Evalue 9.30e-30

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Taxonomy

Cucumis sativus → Cucumis → Cucurbitales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 666
ATGCAATCTTCTCTCGTGTTGGCGCGGGCGACAAGTATTCTCAAGGGTGCATCAAGCTCCAGCTTGATAATCATCGATGAGCTCGGACGTGGAACATCAACGTATGATGGCTTCGGGCTTGCATGGGCTATTTCTGAGCACCTGTGCGACTCAATCCAGGCGCCGACGCTCTTTGCTACGCACTTCCATGAGCTCACAAAGCTGGCAGGAAAGGGGGGCGTCCGAAATTTGCACGTGGACGCCAAGCTTGACACAGAGAACAACAAGCTGACAATGCTGCACGAGCTAAAAGATGGAGTTAGCAGCAAGAGCTTTGGCATTGAATGCGCAGAGCTCGCGAACATGCCGCAGGAGGTAATTGATCAGGCGCGGGAGAAGCAGAAAGAGCTCGAGCAGGAGCAGGCGCAGCAACAGCGTGATTCAATGAGTGACAATGACGGTCACGGAGCGCTAGCTGGAGCAAAGCGCAAGCGTGTTGAGAGCTCGTCTGAAGAGGAGTGTGGGCGGAAGAAGATTCAGCACTTCTTAGACGACTTCAGGTCACTAGATCTGTCTTCCATGAGCGAGAGCCAGGTGTTAGCAGAGACGTCAAAATTGAGAGACGGCCTTATGAAGGATGTAGAGTCGAATGCGTGGCTGAAGAACACGCTCGGACAGGTTGCGTGA
PROTEIN sequence
Length: 222
MQSSLVLARATSILKGASSSSLIIIDELGRGTSTYDGFGLAWAISEHLCDSIQAPTLFATHFHELTKLAGKGGVRNLHVDAKLDTENNKLTMLHELKDGVSSKSFGIECAELANMPQEVIDQAREKQKELEQEQAQQQRDSMSDNDGHGALAGAKRKRVESSSEEECGRKKIQHFLDDFRSLDLSSMSESQVLAETSKLRDGLMKDVESNAWLKNTLGQVA*