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sw_8_scaffold_4039_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(2157..2600)

Top 3 Functional Annotations

Value Algorithm Source
Tubulin alpha chain n=2 Tax=Trebouxiophyceae RepID=TBA_CHLVU similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 300
  • Evalue 1.10e-78
Tubulin alpha chain {ECO:0000313|EMBL:EIE18529.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 147.0
  • Bit_score: 300
  • Evalue 1.60e-78
TUA1; alpha tubulin similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 147.0
  • Bit_score: 299
  • Evalue 6.20e-79

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 444
ATGCCCTCCGACAAGACCATCGGCGGTGGTGACGACGCTTTCAACACCTTCTTCAGCGAGACCGGCGCCGGCAAGCATGTGCCTCGCTGCGTCTTCCTTGACCTCGAGCCCACCGTGATTGATGAGGTCCGCACTGGCACTTATCGCCAGCTCTTCCATCCGGAACAGCTCATCAGTGGCAAAGAGGATGCTGCCAACAACTTCGCTCGTGGCCATTACACTATCGGCAAGGAGATTGTTGACCTCTGCCTCGACCGCATCCGCAAGCTGGCTGACAACTGCACCGGCCTTCAAGGATTCTTGGTTTTCAATGCCGTTGGCGGTGGCACCGGCTCCGGCCTTGGAAGCCTGCTACTCGAGCGTCTGAGCGTGGACTATGGCAAGAAGAGCAAGCTTGGCTTCACTGTCTACCCAAGTCCCCAGGTGAGCACTGCCATGGTTTAG
PROTEIN sequence
Length: 148
MPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAMV*