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sw_8_scaffold_4816_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(3492..5114)

Top 3 Functional Annotations

Value Algorithm Source
Integrin alpha N-terminal domain-containing protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z0G7_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 534.0
  • Bit_score: 352
  • Evalue 5.40e-94
Integrin alpha N-terminal domain-containing protein {ECO:0000313|EMBL:EIE24136.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Co similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 534.0
  • Bit_score: 352
  • Evalue 7.70e-94
Cell surface protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 244.0
  • Bit_score: 85
  • Evalue 4.60e-14

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1623
CTGAACGACATGAGTGATCTTAGCGATGAGCGGCTCTTTGATTTGGACGAGTTTGACGACGGCAGCAACGCGCTCTTCGAAGACGACATCTTCCCGTTCCTTTTTGACGATGACGACGACAACATGAGCATTGAAGATCTCTGGCTCAACGAGATCGGTGGCGATGAGGAGCAAGAAGAACACGACATTGTTAACAACCGCATTGGTGTTGACCCGCACGTGCTCGCAAATGGAGCAATTGGTGACATTGATGGCGACGGCGTTGACGACCTTGTTGTGCCGGTTTCATACTTTTTCGATGAGGACTACTACAAAAAGCCCGAAAACAGGCGCAAGCTCCGCGGTGTGGATCCACAGCTGTTCCTTGCAACAGGCGTGGTGGTTTACATGCACGATCAAATCTTCAACGATTGGACGATCAAGTGGAAGGCACATCTGGACCTCACAACCGCCAATGCCAGTCGAAAAGCGTATGCCCTTTCTCCGCCCACGTTAGCTGACCTTGACGGCGACGGAATGCTCGAAATTGTGGTCGGTACCTCCGTCGGGTTCGTGTACGCGCTCAACCCGAGCGATGGCTCGACGATGGAGCACTATCCGTTGCAGCTTGGCGAGGTTCAAGCGCAAGTGACCGTGGAAGACATGGACGATGATGGTGCACTAGATTTAGTCGTGTGCGACATGGACGGTGTTGTTGCAGCTTTCACTGGTGACTCTGGAAGCAAGCTGTGGGAACGACACATGGGGAGTCCAATCGCGCAAGCAGCTTCCATTGGCGACGTCACTGGGAGTGGCAAACTCGATGTGGTGGTATCGACCACAGCCGGCGGCGTTCACATTCTCAACGGCGGCAGTGGAACTAGTGTCTTTCACACTCGCACTGCTGGGAGCATTGTGTCCCCGCCACTTTTGACGCAGCTGAACAGCTCATCTTCAGGACTCCACGTCGTTGTGCCCTCCTTTGATGGCTTTGTCTATACATTTGACGGGACCAATTCTTCGAAACGAGACGTTGTTGACCTAGGGGAGCGGTCGCTTGCGATGCCGCTCACTCATGACCTCGACGGTGACGGGCTGCTCGATATCGTTGTTGCAACCATGTCGGGCACCGTATTTTCCATTGAAACGCTTGTACGAACCTCACCGCTTATGTCAGTGAAGTCACAGGCGCCTGAGGGGGTTCCACTCGTTGCGAGACCAAACTGGCGAGGATTGTACGCTCTCACGACGCAGTCGCGAGGGTGGCGAGATATCTTTGGCAAGAGGGCTGCGTTTCCATTCACAATTGTTGATAGGAGTAAGAGCAAACAGACTGTGAACTTCACGGTCTCTGCCTTTATGATGTCCAATGAAGATGGAGCGAGTGGGCAGATGGTACGTTCATACTCCACGTCTGGGCGTAAAATTGCAGTCGTGGATGTTCCGCCAGTTCGTGGCGCTGGCTCGCTCGAGCTTCGAATGAAAGATGCTGCTGGGAGGCGCTTTTCTGACAGCTTAGATGTCACCTTCCACACGTCCCATTATCGGATCCTCAAGTGGATTGTTACTGCTGCAATGGGCCTGGGGATGCTTGGTATCTTCCACGCTACTCGTGAGCAAGGAGGCGAGTCACTGCCTGGGTGA
PROTEIN sequence
Length: 541
LNDMSDLSDERLFDLDEFDDGSNALFEDDIFPFLFDDDDDNMSIEDLWLNEIGGDEEQEEHDIVNNRIGVDPHVLANGAIGDIDGDGVDDLVVPVSYFFDEDYYKKPENRRKLRGVDPQLFLATGVVVYMHDQIFNDWTIKWKAHLDLTTANASRKAYALSPPTLADLDGDGMLEIVVGTSVGFVYALNPSDGSTMEHYPLQLGEVQAQVTVEDMDDDGALDLVVCDMDGVVAAFTGDSGSKLWERHMGSPIAQAASIGDVTGSGKLDVVVSTTAGGVHILNGGSGTSVFHTRTAGSIVSPPLLTQLNSSSSGLHVVVPSFDGFVYTFDGTNSSKRDVVDLGERSLAMPLTHDLDGDGLLDIVVATMSGTVFSIETLVRTSPLMSVKSQAPEGVPLVARPNWRGLYALTTQSRGWRDIFGKRAAFPFTIVDRSKSKQTVNFTVSAFMMSNEDGASGQMVRSYSTSGRKIAVVDVPPVRGAGSLELRMKDAAGRRFSDSLDVTFHTSHYRILKWIVTAAMGLGMLGIFHATREQGGESLPG*