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sw_8_scaffold_5361_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1716..2219

Top 3 Functional Annotations

Value Algorithm Source
Photosystem I subunit II, chloroplast n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N6J0_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 135.0
  • Bit_score: 154
  • Evalue 1.20e-34
Photosystem I subunit II {ECO:0000313|EMBL:JAC69812.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetr similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 134.0
  • Bit_score: 156
  • Evalue 3.30e-35
photosystem I protein PsaD similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 108
  • Evalue 2.70e-21

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 504
ATGGCGCAGACTGCGGTGGCAAGCGGTGCTAGGGCCAGCGGGCAGGCACTGGCCAGGAGGGAGCAGAAGGGGCGAAACGGATGCGCAGGCAAGCGCGGCGCAGTGACGCCGATGGCGCAGGAGCAGGCGGCGCCAGAGGAGAAGGCTGAGAAAAAGGAGAAGAAGGAGTGGACACCCCCACCCCTCGACCCAAACACGCCCACGCCCATCTTTGGTGGCAGCACGGGCGGCCTCCTCCGGAAGGCACAGACAGAGGAGTTCTACGTCATCACCTGGTCATCCAAGAAGGAGCAGCTCTTCGAGATGCCCACTGGCGGCTCTGCCATCATGCGCGAGGGAAACAACCTCCTCAAGCTCGCGCGCAAGGAGCAGTGCCTCGCCCTCCTCGCCCAGGTTCGCTCTCTCAACACTCAACGCTCTTCTTTTCTACTCTGCTTTCATAGCCAGTGCTTTGATCCCATTCCTCTGCTGTTTGGAGCAGCTTCGCAGCAAGTACAAAATTGA
PROTEIN sequence
Length: 168
MAQTAVASGARASGQALARREQKGRNGCAGKRGAVTPMAQEQAAPEEKAEKKEKKEWTPPPLDPNTPTPIFGGSTGGLLRKAQTEEFYVITWSSKKEQLFEMPTGGSAIMREGNNLLKLARKEQCLALLAQVRSLNTQRSSFLLCFHSQCFDPIPLLFGAASQQVQN*