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sw_8_scaffold_5404_6

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(3118..3786)

Top 3 Functional Annotations

Value Algorithm Source
Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MTS6_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 213.0
  • Bit_score: 233
  • Evalue 1.50e-58
Eukaryotic translation initiation factor 3 subunit I {ECO:0000256|HAMAP-Rule:MF_03008, ECO:0000256|SAAS:SAAS00003572}; Short=eIF3i {ECO:0000256|HAMAP-Rule:MF_03008};; TaxID=564608 species="Eukaryota; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 213.0
  • Bit_score: 233
  • Evalue 2.10e-58
wd-40 repeat containing protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 164.0
  • Bit_score: 74
  • Evalue 3.30e-11

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Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 669
ATGGGCGCGCCCGCGTCTGTTCGTGTGTACAAAATGCCGCCCACTGGTCATGAGGACCACCTTCCCTCCCAGCCCGAGCAGCGCGTTGACTTTGGCAACCAACGTGTGACACGCGCACGCTTCGGCCCGCTGAACCAGACCATCGTTGCTAGCGATGAGAACGGCACGCTCCGCATGCTTGACACTGAGACGGGACAGGTGAAGGAGGAGGTTCGCGAGGCACATTCCCGTGCTATCACCGACCTGCAGTTCTCGCACGACATGACGCACTTCATCACCTCAAGCGCTGATAAAGAAGCCAAGCTTTGGGACTCGCGAACACTCCGACACCTCAGGACGTACACAAGCGACCGCCCCATTAACGCCGCTGCTATCTCACCCTTGATGGACCACGTCGTCCTTGGCGGTGGCCAGGAAGCCATGGCAGTGACACAGACAGCGAGTAAAGCTGGCAAGTTTGAGAGCAAGCTGTACCATAAGATCTTTGAGGAAGAGCTCGGCACAATCAAGGGCCACTTTGGGCCAATCAATGCCATTGCGTTTGCACCAGATGGAAGATCCTTCACAACGGGCGGTGAAGATGGGTTTGCTCGAGTGCACTTCTTCGATAAGGAGGTACTTAAGCTTAACTTAACGGAAAATCTTGAAGACAAAGGGCCGCCAAAGTAG
PROTEIN sequence
Length: 223
MGAPASVRVYKMPPTGHEDHLPSQPEQRVDFGNQRVTRARFGPLNQTIVASDENGTLRMLDTETGQVKEEVREAHSRAITDLQFSHDMTHFITSSADKEAKLWDSRTLRHLRTYTSDRPINAAAISPLMDHVVLGGGQEAMAVTQTASKAGKFESKLYHKIFEEELGTIKGHFGPINAIAFAPDGRSFTTGGEDGFARVHFFDKEVLKLNLTENLEDKGPPK*