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sw_8_scaffold_5939_3

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(2039..2659)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00003219}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00003219};; TaxID=50452 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magno similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 176
  • Evalue 3.70e-41
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4N3D0_THESL similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 177.0
  • Bit_score: 173
  • Evalue 2.30e-40
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 181.0
  • Bit_score: 107
  • Evalue 4.30e-21

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Taxonomy

Arabis alpina → Arabis → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 621
GTGTGGCTGAGAGATCTGCTGACGCTGCGCTGGGCTCTGCAGGTGATGGAGCAGCAGACTGTCACCGTGGCGAAGGCGGGCATCCACACCTCCCTCAACGCCAGATGCAGCGTGATCGCAGCTGCGAACCCCAAGTACGGCAGCTACAGCCACAACACCAGTGTGGCTGAGAACCTCAATTTGCCCGACTCCATCCTTTCGCGCTTCGATCTGCTGTTCATCATGTTGGATCAGTCGGACGACACGACGGACAGCGAGATCTCCGAGCACGTTCTGCGGCTGCACCGGGTCCGTGGCGTTGACGATGACCTCAGCGGCGAGCAGAGCGCTGGAGGCTGTGCCGTCGCGTACAGCCGTGAAGCTGAGGAGGCACAGGATGCAGGCTCCGAGGACATCTTCGTCAAGTACGACACGCTGCTCTCAGGAAGCAGAGGCAGGCGTCGCCAGTCGAACCAGAAGAAGCTTCTGCATCCCAAATTCTTCCAGAAATTCATCCACTACGCCAAAGAGCGTCCGCAGAAGCCGAAATTCGACGACGACGCTGCGCAGATGCTTGCTGACCAGTACACGGTGCGTGAGGAGCTCGAGATGATTCTGCTGCACTGCTCGATACGCGAGTGA
PROTEIN sequence
Length: 207
VWLRDLLTLRWALQVMEQQTVTVAKAGIHTSLNARCSVIAAANPKYGSYSHNTSVAENLNLPDSILSRFDLLFIMLDQSDDTTDSEISEHVLRLHRVRGVDDDLSGEQSAGGCAVAYSREAEEAQDAGSEDIFVKYDTLLSGSRGRRRQSNQKKLLHPKFFQKFIHYAKERPQKPKFDDDAAQMLADQYTVREELEMILLHCSIRE*